2021-04-27 16:41:13 [26387 | ERROR]: Traceback (most recent call last):
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/manage/external/rmq.py", line 208, in _continue
result = await super()._continue(communicator, pid, nowait, tag)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/plumpy/process_comms.py", line 607, in _continue
proc = cast('Process', saved_state.unbundle(self._load_context))
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/plumpy/persistence.py", line 60, in unbundle
return Savable.load(self, load_context)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/plumpy/persistence.py", line 452, in load
return load_cls.recreate_from(saved_state, load_context)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/plumpy/processes.py", line 238, in recreate_from
process = cast(Process, super().recreate_from(saved_state, load_context))
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/plumpy/persistence.py", line 477, in recreate_from
call_with_super_check(obj.load_instance_state, saved_state, load_context)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/plumpy/base/utils.py", line 29, in call_with_super_check
wrapped(*args, **kwargs)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/engine/processes/workchains/workchain.py", line 105, in load_instance_state
super().load_instance_state(saved_state, load_context)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/engine/processes/process.py", line 284, in load_instance_state
super().load_instance_state(saved_state, load_context)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/plumpy/processes.py", line 620, in load_instance_state
decoded = self.decode_input_args(saved_state[BundleKeys.INPUTS_RAW])
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/engine/processes/process.py", line 607, in decode_input_args
return serialize.deserialize(encoded)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/utils/serialize.py", line 230, in deserialize
return yaml.load(serialized, Loader=AiiDALoader)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/__init__.py", line 114, in load
return loader.get_single_data()
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 43, in get_single_data
return self.construct_document(node)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 47, in construct_document
data = self.construct_object(node)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 92, in construct_object
data = constructor(self, node)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/utils/serialize.py", line 131, in mapping_constructor
yaml_node = loader.construct_mapping(mapping, deep=True)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 210, in construct_mapping
return super().construct_mapping(node, deep=deep)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 135, in construct_mapping
value = self.construct_object(value_node, deep=deep)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 99, in construct_object
for dummy in generator:
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 404, in construct_yaml_map
value = self.construct_mapping(node)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 210, in construct_mapping
return super().construct_mapping(node, deep=deep)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 135, in construct_mapping
value = self.construct_object(value_node, deep=deep)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/yaml/constructor.py", line 92, in construct_object
data = constructor(self, node)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/utils/serialize.py", line 56, in node_constructor
return orm.load_node(uuid=yaml_node)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/utils/__init__.py", line 197, in load_node
return load_entity(
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/utils/__init__.py", line 77, in load_entity
return entity_loader.load_entity(
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/utils/loaders.py", line 213, in load_entity
entity = builder.one()[0]
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/querybuilder.py", line 2179, in one
res = self.all()
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/querybuilder.py", line 2252, in all
matches = list(self.iterall(batch_size=batch_size))
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/querybuilder.py", line 2209, in iterall
query = self.get_query()
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/querybuilder.py", line 2088, in get_query
query = self._build()
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/querybuilder.py", line 1938, in _build
self._query = self._query.filter(self._build_filters(alias, filter_specs))
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/querybuilder.py", line 1373, in _build_filters
self._impl.get_filter_expr(
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/implementation/django/querybuilder.py", line 212, in get_filter_expr
self.get_filter_expr(
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/implementation/django/querybuilder.py", line 237, in get_filter_expr
expr = self.get_filter_expr_from_column(operator, value, column)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/aiida/orm/implementation/querybuilder.py", line 217, in get_filter_expr_from_column
expr = database_entity.cast(String).like(value)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/orm/attributes.py", line 236, in __getattr__
return getattr(self.comparator, key)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/util/langhelpers.py", line 987, in __getattr__
return self._fallback_getattr(key)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/orm/properties.py", line 364, in _fallback_getattr
return getattr(self.__clause_element__(), key)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/util/langhelpers.py", line 974, in oneshot
result = fn(*args, **kw)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/orm/properties.py", line 316, in _memoized_method___clause_element__
return self.adapter(self.prop.columns[0])
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/orm/util.py", line 680, in _adapt_element
return self._adapter.traverse(elem)._annotate(
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/util.py", line 936, in traverse
return self.columns[obj]
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/util/_collections.py", line 745, in __missing__
self[key] = val = self.creator(self.weakself(), key)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/util.py", line 943, in _locate_col
c = ClauseAdapter.traverse(self, col)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/visitors.py", line 240, in traverse
return replacement_traverse(obj, self.__traverse_options__, replace)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/visitors.py", line 484, in replacement_traverse
obj = clone(obj, **opts)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/visitors.py", line 473, in clone
newelem = replace(elem)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/visitors.py", line 236, in replace
e = v.replace(elem)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/util.py", line 848, in replace
return self._corresponding_column(col, True)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/util.py", line 820, in _corresponding_column
newcol = self.selectable.corresponding_column(
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 560, in corresponding_column
if self.c.contains_column(column):
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/util/langhelpers.py", line 893, in __get__
obj.__dict__[self.__name__] = result = self.fget(obj)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 647, in columns
self._populate_column_collection()
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/selectable.py", line 1393, in _populate_column_collection
col._make_proxy(self)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/schema.py", line 1802, in _make_proxy
c = self._constructor(
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/schema.py", line 1568, in __init__
self._init_items(*args)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/schema.py", line 121, in _init_items
spwd(self)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/base.py", line 461, in _set_parent_with_dispatch
self._set_parent(parent)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/schema.py", line 2282, in _set_parent
self.parent._on_table_attach(self._set_table)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/sql/schema.py", line 1722, in _on_table_attach
event.listen(self, "after_parent_attach", fn)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/event/api.py", line 102, in listen
_event_key(target, identifier, fn).listen(*args, **kw)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/event/api.py", line 25, in _event_key
tgt = evt_cls._accept_with(target)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/event/base.py", line 232, in _accept_with
if hasattr(target, "dispatch"):
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/event/base.py", line 298, in __get__
obj.__dict__["dispatch"] = disp = self.dispatch._for_instance(obj)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/event/base.py", line 121, in _for_instance
return self._for_class(instance_cls)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/event/base.py", line 117, in _for_class
return self.__class__(self, instance_cls)
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/site-packages/sqlalchemy/event/base.py", line 83, in __init__
self._empty_listeners = self._empty_listener_reg[instance_cls]
File "/home/daniele/anaconda3/envs/aiida_py38/lib/python3.8/weakref.py", line 383, in __getitem__
return self.data[ref(key)]
RecursionError: maximum recursion depth exceeded while calling a Python object
@danieleongari reports the following error when submitting ~200 workchains with aiida-core 1.6.1
the error goes away when adding a
time.sleep(2)in between submissionsYour environment