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1. processMultifocal processMultifocal Public

   Procedure to list denovo mutations for each tumor in a group of clustered tumors

   Python

2. plotBurden plotBurden Public

   Workflow to investigate mutational burden at the presence of cancer-specific driver mutations. This was carried out using pan-cancer TCGA MAF-files and through screening mutational profiles ranked …

   Jupyter Notebook

3. handyScripts handyScripts Public

   A collection of smaller scripts often used for quick common analyses

   Python

4. exome exome Public

   Scripts for whole exome sequencing analysis

   Python

5. CITE-Seq CITE-Seq Public

   Seurat R scripts adapted for clustering single-cell RNA-seq data

   Jupyter Notebook

6. configs configs Public

   Forked from nf-core/configs

   Config files used to define parameters specific to compute environments at different Institutions

   Nextflow