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Fix broken expansion boxes #346
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@@ -330,16 +330,12 @@ using a transfer program, it needs to be installed on your local machine, not yo | |
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| ## Transferring Data Between your Local Machine and the Cloud | ||
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| If you're using Windows with PuTTY instead of Git Bash, please select the alternative option here: | ||
| <select id="id_platform" name="platformlist" onchange="change_content_by_platform('id_platform');return false;"> | ||
| If you're using Linux, Mac OS, or Windows with Git Bash on your local machine, you can use | ||
| `scp` to upload data to your virtual machine. | ||
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| <option value="unix" id="id_unix" selected> Linux, Mac OS, Git Bash </option> | ||
| <option value="win" id="id_win"> PuTTY </option> | ||
| </select> | ||
| ::::::::::::::: spoiler | ||
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| <div id="div_unix" style="display:block" markdown="1"> | ||
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| ### Uploading Data to your Virtual Machine with scp | ||
| ### SCP | ||
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| `scp` stands for 'secure copy protocol', and is a widely used UNIX tool for moving files | ||
| between computers. The simplest way to use `scp` is to run it in your local terminal, | ||
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@@ -388,16 +384,19 @@ $ scp dcuser@ip.address:/home/dcuser/shell_data/untrimmed_fastq/scripted_bad_rea | |
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| Remember that in both instances, the command is run from your local machine, we've just flipped the order of the to and from parts of the command. | ||
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| </div> | ||
| ::::::::::::::::::::::: | ||
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| If you are using Windows without Git Bash on your local machine, you can use `pscp.exe` | ||
| to upload data to your virtual machine. | ||
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| <div id="div_win" style="display:block" markdown="1"> | ||
| ::::::::::::::: spoiler | ||
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| ### Uploading Data to your Virtual Machine with PSCP | ||
| ### PCSP | ||
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| If you're using a Windows PC without Git Bash, we recommend you use the *PSCP* program. | ||
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Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. you are |
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| This program is from the same suite of tools as the PuTTY program we have been using to connect. | ||
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| 1. If you haven't done so, download pscp from [http://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe](https://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe) | ||
| 1. If you haven't done so, download *PSCP* from [http://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe](https://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe) | ||
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Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. you have not |
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| 2. Make sure the *PSCP* program is somewhere you know on your computer. In this case, | ||
| your Downloads folder is appropriate. | ||
| 3. Open the windows [PowerShell](https://en.wikipedia.org/wiki/Windows_PowerShell); | ||
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@@ -426,13 +425,11 @@ C:\User\your-pc-username\Downloads> pscp.exe dcuser@ec2-54-88-126-85.compute-1.a | |
| C:\User\your-pc-username\Downloads | ||
| ``` | ||
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| </div> | ||
| ::::::::::::::::::::::: | ||
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| :::::::::::::::::::::::::::::::::::::::: keypoints | ||
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| - Scripts are a collection of commands executed together. | ||
| - Transferring information to and from virtual and local computers. | ||
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| :::::::::::::::::::::::::::::::::::::::::::::::::: | ||
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we have