Skip to content

use run_shell_cmd in custom easyblock for RepeatModeler#3289

Merged
boegel merged 2 commits intoeasybuilders:5.0.xfrom
branfosj:20240406135432_new_pr_repeatmodeler
Apr 9, 2024
Merged

use run_shell_cmd in custom easyblock for RepeatModeler#3289
boegel merged 2 commits intoeasybuilders:5.0.xfrom
branfosj:20240406135432_new_pr_repeatmodeler

Conversation

@branfosj
Copy link
Copy Markdown
Member

@branfosj branfosj commented Apr 6, 2024

(created using eb --new-pr)

@branfosj
Copy link
Copy Markdown
Member Author

branfosj commented Apr 6, 2024

Test report by @branfosj

Overview of tested easyconfigs (in order)

  • SUCCESS RepeatModeler-2.0.4-foss-2022a.eb
  • SUCCESS MariaDB-10.5.8-GCC-10.2.0.eb
  • SUCCESS Kent_tools-411-GCC-10.2.0.eb
  • SUCCESS TWL-NINJA-0.97-cluster_only-GCC-10.2.0.eb
  • SUCCESS BLAST+-2.11.0-gompi-2020b.eb
  • SUCCESS LTR_retriever-2.9.0-foss-2020b.eb
  • SUCCESS RepeatModeler-2.0.2a-foss-2020b.eb

Build succeeded for 7 out of 7 (2 easyconfigs in total)
bear-pg0105u03a - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Platinum 8360Y CPU @ 2.40GHz (icelake), Python 3.6.8
See https://gist.github.com/branfosj/3c44519a9746663eff502023b3999397 for a full test report.

Copy link
Copy Markdown
Member

@boegel boegel left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

lgtm

@boegel
Copy link
Copy Markdown
Member

boegel commented Apr 9, 2024

Test report by @boegel

Overview of tested easyconfigs (in order)

  • SUCCESS RepeatModeler-2.0.4-foss-2022a.eb

Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3564.doduo.os - Linux RHEL 8.8, x86_64, AMD EPYC 7552 48-Core Processor, Python 3.6.8
See https://gist.github.com/boegel/7039ba7a463b2ca4955d9cd220ed066b for a full test report.

@boegel boegel merged commit 02d216e into easybuilders:5.0.x Apr 9, 2024
@branfosj branfosj deleted the 20240406135432_new_pr_repeatmodeler branch April 9, 2024 20:22
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

Projects

No open projects
Status: No status

Development

Successfully merging this pull request may close these issues.

2 participants