{mpi,toolchain}[intel-compilers/2024.0.0,system/system] impi v2021.11.0, iimpi v2023.11 by bartoldeman · Pull Request #19314 · easybuilders/easybuild-easyconfigs

bartoldeman · 2023-11-24T13:01:47Z

(created using eb --new-pr)

…-2023.11.eb

bartoldeman · 2023-11-24T13:03:36Z

Needs easybuilders/easybuild-easyblocks#3039

bartoldeman · 2023-11-24T13:05:06Z

@boegelbot please test @ generoso
EB_ARGS="--include-easyblocks-from-pr 3039"

boegelbot · 2023-11-24T13:10:11Z

@bartoldeman: Request for testing this PR well received on login1

PR test command 'EB_PR=19314 EB_ARGS="--include-easyblocks-from-pr 3039" EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19314 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 12241

Test results coming soon (I hope)...

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boegelbot · 2023-11-24T13:11:37Z

Test report by @boegelbot
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#3039
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in total)
cns3 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/b68205b6e14d93cf068e93c37395fcc6 for a full test report.

bartoldeman · 2023-11-24T13:17:10Z

Generoso fails only at the testing stage using this error:

ERROR EasyBuild crashed with an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Sanity check failed: sanity check command mpirun -n 4 /tmp/boegelbot/impi/2021.11.0/intel-compilers-2024.0.0/mpi_test exited with code 143 (output: Abort(1614479) on node 0 (rank 0 in comm 0): Fatal error in PMPI_Init: Unknown error class, error stack:
MPIR_Init_thread(189)............: 
MPID_Init(1561)..................: 
MPIDI_OFI_mpi_init_hook(1674)....: 
insert_addr_table_roots_only(472): OFI get address vector map failed
) (at easybuild/easybuild-framework/easybuild/framework/easyblock.py:3655 in _sanity_check_step)

can probably be worked around using an environment variable. Will have a look.

bartoldeman · 2023-11-24T16:05:30Z

@boegelbot please test @ generoso
EB_ARGS="--include-easyblocks-from-pr 3039" FI_PROVIDER=tcp

boegelbot · 2023-11-24T16:10:08Z

@bartoldeman: Request for testing this PR well received on login1

PR test command 'EB_PR=19314 EB_ARGS="--include-easyblocks-from-pr 3039" EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19314 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 12244

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
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boegelbot · 2023-11-24T16:11:31Z

Test report by @boegelbot
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#3039
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in total)
cns2 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/46418675393746fe5597984849a7f5db for a full test report.

bartoldeman · 2023-11-24T16:19:43Z

@boegelbot please test @ jsc-zen2
EB_ARGS="--include-easyblocks-from-pr 3039"

boegelbot · 2023-11-24T16:20:09Z

@bartoldeman: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=19314 EB_ARGS="--include-easyblocks-from-pr 3039" EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_19314 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

exit code: 0
output:

Submitted batch job 3792

Test results coming soon (I hope)...

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boegelbot · 2023-11-24T16:25:35Z

Test report by @boegelbot
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#3039
SUCCESS
Build succeeded for 3 out of 3 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/49615d563758761433840d068bd4cb75 for a full test report.

bartoldeman · 2023-11-24T16:35:47Z

@boegelbot please test @ generoso
CORE_CNT=8 EB_ARGS="--include-easyblocks-from-pr 3039"

boegelbot · 2023-11-24T16:40:10Z

@bartoldeman: Request for testing this PR well received on login1

PR test command 'EB_PR=19314 EB_ARGS="--include-easyblocks-from-pr 3039" EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19314 --ntasks="8" ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 12246

Test results coming soon (I hope)...

Details

- notification for comment with ID 1825892230 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2023-11-24T16:41:43Z

Test report by @boegelbot
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#3039
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in total)
cnx1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/7992779066e7da14b7eca290cab500ee for a full test report.

jfgrimm · 2023-11-28T12:07:26Z

Test report by @jfgrimm
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#3037, easybuilders/easybuild-easyblocks#3039
SUCCESS
Build succeeded for 3 out of 3 (2 easyconfigs in total)
node041.viking2.yor.alces.network - Linux Rocky Linux 8.8, x86_64, AMD EPYC 7643 48-Core Processor, Python 3.6.8
See https://gist.github.com/jfgrimm/e80fd091c8cfd7314a1f221b91bf9744 for a full test report.

see easybuilders/easybuild-easyconfigs#19314 (comment) this is similar to `PSM3_DEVICES='self,shm'` but affects Intel MPI at a higher level; the included libfabric there somehow seems to choose the `mlx` provider (not in upstream libfabric) which fails on Generoso.

bartoldeman · 2023-12-06T16:27:54Z

@boegelbot please test @ generoso
EB_ARGS="--include-easyblocks-from-pr 3039"

boegelbot · 2023-12-06T16:30:05Z

@bartoldeman: Request for testing this PR well received on login1

PR test command 'EB_PR=19314 EB_ARGS="--include-easyblocks-from-pr 3039" EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19314 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 12329

Test results coming soon (I hope)...

Details

- notification for comment with ID 1843242648 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2023-12-06T16:31:45Z

Test report by @boegelbot
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#3039
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/5358906825ff901f55f9018a2d8aff8f for a full test report.

bartoldeman · 2023-12-06T16:49:48Z

ok, with I_MPI_FABRICS=shm on generoso @boegelbot seems to be a happy camper

jfgrimm

LGTM

adding easyconfigs: impi-2021.11.0-intel-compilers-2024.0.0.eb, iimpi…

95f7673

…-2023.11.eb

bartoldeman added the update label Nov 24, 2023

bartoldeman mentioned this pull request Nov 27, 2023

{numlib}[system/system] imkl v2024.0.0, imkl-FFTW v2024.0.0, intel v2023.11 #19326

Merged

1 task

Neves-P mentioned this pull request Nov 27, 2023

{chem,devel}[foss/2023a,gompi/2023a] Boost.MPI v1.79.0, waLBerla v6.1 #19252

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bartoldeman mentioned this pull request Nov 28, 2023

Set I_MPI_FABRICS=shm on Generoso boegel/boegelbot#29

Merged

jfgrimm added this to the 4.x milestone Nov 29, 2023

jfgrimm approved these changes Dec 6, 2023

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jfgrimm merged commit c25b577 into easybuilders:develop Dec 6, 2023

boegel removed this from the 4.x milestone Dec 30, 2023

boegel added this to the next release (4.9.0) milestone Dec 30, 2023

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