fix python-igraph easyconfigs to actually use igraph dependency rather than build one + update easyconfig for synthcity 0.2.11 accordingly (changed version for ipython-igraph dependency)

[pavelToman]

(created using eb --new-pr)

python-igraph should use igraph as depepndency, but I it does not now and compiles its own _igraph.abi3.so which is not linked to the igraph's libigraph.so. Thus it needs CMake (and Clang?) during the installation.

In this PR I fix this in all recent python-igraph easyconfigs and python-igraph uses igraph as depepndency, thus it does not need the CMake and Clang in deps anymore.

The problem is with version for foss/2023b, where the python-igraph version is too new for igraph version, thus I change the version for this toolchain. It is used as a dependency only in synthcity-0.2.11-foss-2023b.eb where it is as test dependency, not runtime. I am gonna update this Synthcity either

[pavelToman]

@boegelbot please test @ jsc-zen3

[boegelbot]

@pavelToman: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=24288 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_24288 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

• exit code: 0
• output:

Submitted batch job 8483

Test results coming soon (I hope)...

Details

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Message to humans: this is just bookkeeping information for me,
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[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.6, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/276fe58e4c96bb3bdd6d3cc1549bf970 for a full test report.

[boegel]

lgtm, but needs the change from #24309 to make CI pass

The version change is a bit unfortunate, but it's clear why it's needed: igraph 0.10.12 is only compatible with python-igraph 0.11.5 (0.11.8 needs newer igraph)

[Micket]

I can't make any sense of this PR.

You are saying

Thus it needs CMake (and Clang?) during the installation.

but, this PR removes CMake and clang etc. ???

[pavelToman]

I can't make any sense of this PR.

You are saying

Thus it needs CMake (and Clang?) during the installation.

but, this PR removes CMake and clang etc. ???

python-igraph should use igraph as depepndency, but now it does not, thus it needs the CMake and Clang now - it compiles its own igraph instead of use installed one.
With my update the python-igraph uses igraph as a dependency, thus it does not need the CMake and Clang in deps anymore.

But you are right - the description is confusing, I update it.

[boegel]

@boegelbot please test @ jsc-zen3
CORE_CNT=16

[boegelbot]

@boegel: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=24288 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_24288 --ntasks="16" ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

• exit code: 0
• output:

Submitted batch job 8838

Test results coming soon (I hope)...

Details

- notification for comment with ID 3552411704 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 4 out of 4 (total: 1 hour 42 mins 6 secs) (4 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.6, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/539274ab0cb9ee9e628657044970bad5 for a full test report.

[boegel]

lgtm

[boegel]

Test report by @boegel
SUCCESS
Build succeeded for 4 out of 4 (4 easyconfigs in total)
node3618.doduo.os - Linux RHEL 9.6, x86_64, AMD EPYC 7552 48-Core Processor (zen2), Python 3.9.21
See https://gist.github.com/boegel/daf54639e969ca69df4ccc125e838bbd for a full test report.

[boegel]

Going in, thanks @pavelToman!