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27 changes: 27 additions & 0 deletions easybuild/easyconfigs/e/edlib/edlib-1.3.9.post1-GCC-14.2.0.eb
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easyblock = 'PythonBundle'

name = 'edlib'
version = '1.3.9.post1'

homepage = 'https://martinsos.github.io/edlib'
description = "Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance."

toolchain = {'name': 'GCC', 'version': '14.2.0'}

builddependencies = [('setuptools', '80.9.0')]

dependencies = [
('Python', '3.13.1'),
('Python-bundle-PyPI', '2025.04'),
]

exts_list = [
('cogapp', '3.6.0', {
'checksums': ['ec2a9170bfa644bf0d91996fdb5576c13d7e5e848bb2378a6f92727b48f92604'],
}),
(name, version, {
'checksums': ['b0fb6e85882cab02208ccd6daa46f80cb9ff1d05764e91bf22920a01d7a6fbfa'],
}),
]

moduleclass = 'bio'
Original file line number Diff line number Diff line change
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easyblock = 'PythonBundle'

name = 'ont-fast5-api'
version = '4.1.3'

homepage = 'https://github.com/nanoporetech/ont_fast5_api'
description = "ont_fast5_api is a simple interface to HDF5 files of the Oxford Nanopore .fast5 file format."

toolchain = {'name': 'foss', 'version': '2025a'}

dependencies = [
('Python', '3.13.1'),
('SciPy-bundle', '2025.06'),
('h5py', '3.14.0'),
]


exts_list = [
('progressbar33', '2.4', {
'modulename': 'progressbar',
'checksums': ['51fe0d9b3b4023db2f983eeccdfc8c9846b84db8443b9bee002c7f58f4376eff'],
}),
(name, version, {
'checksums': ['302d10ed87b439f8f22c2c06d45d68d017e47dd8df9bd48f155cad041f464b68'],
}),
]

sanity_check_paths = {
'files': [
'bin/compress_fast5',
'bin/fast5_subset',
'bin/multi_to_single_fast5',
'bin/single_to_multi_fast5'
],
'dirs': [''],
}

sanity_check_commands = [
"compress_fast5 --help",
"fast5_subset --help",
"multi_to_single_fast5 --help",
"single_to_multi_fast5 --help",
]


moduleclass = 'bio'
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