You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Fix regex not capturing the capital letters after INTERPROSCAN_ in var names e.g. INTERPROSCAN_ANTIFAM
Fix typo in signature.libary.release
Remove quotes around INTERPROSCAN_DATA_DIR and var_val, as they were showing up mid path e.g:
Error: File existence/permissions problem in trying to open HMM file "/opt/apps/eb/software/InterProScan_data/5.73-104.0"/ncbifam/"17.0"/ncbifam.hmm.
HMM file "/opt/apps/eb/software/InterProScan_data/5.73-104.0"/ncbifam/"17.0"/ncbifam.hmm not found (nor an .h3m binary of it)
Test report by @jfgrimm SUCCESS
Build succeeded for 2 out of 2 (total: 59 secs) (2 easyconfigs in total)
node031.viking2.yor.alces.network - Linux Rocky Linux 8.10, x86_64, AMD EPYC 7643 48-Core Processor, Python 3.6.8
See https://gist.github.com/jfgrimm/05d4e71bf0ca0384788c5fecc40145e9 for a full test report.
Test report by @boegelbot SUCCESS
Build succeeded for 2 out of 2 (total: 3 mins 59 secs) (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.7, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.25
See https://gist.github.com/boegelbot/c27e43a891a33d17e9243ebfde786e32 for a full test report.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
2024aissues & PRs related to 2024a common toolchains2025aissues & PRs related to 2025a common toolchainsbug fix
3 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
INTERPROSCAN_in var names e.g.INTERPROSCAN_ANTIFAMsignature.libary.releaseINTERPROSCAN_DATA_DIRandvar_val, as they were showing up mid path e.g: