Merge 25 1 into dev#21067

Merged

mvdbeek merged 337 commits intogalaxyproject:devfrom

mvdbeek:merge_25_1_into_dev

Oct 17, 2025

This pull request is big! We're only showing the most recent 250 commits

Commits on Oct 7, 2025

Refactor credentials management to improve type annotations and consolidate imports

arash77
authored and
mvdbeek
committed
Refactor test_CredentialsManager to consolidate imports

arash77
authored and
mvdbeek
committed
Renames 'reference' to 'service_reference'

arash77
authored and
mvdbeek
committed
Fix credential check to ensure tool ID is present before accessing credentials

arash77
authored and
mvdbeek
committed
Refactor deleteCredentialsGroupForTool function for improved readability

arash77
authored and
mvdbeek
committed
Replaces Secret and Variable with Credential

arash77
authored and
mvdbeek
committed
Update secret property references to is_set

davelopez
authored and
mvdbeek
committed
Add source_version, service_name, and service_version to user credentials and removing service_reference, optional, and multiple from user credentials definition and add optional tag to the credent…

arash77
authored and
mvdbeek
committed
Update GetToolCredentialsDefinition to return None when the tool with the given definition is not found to prevent unnecessary data on listing credentials

arash77
authored and
mvdbeek
committed
Enhance error message in CredentialsService to include source type, ID, and version for better debugging context

arash77
authored and
mvdbeek
committed
Refactor error handling in CredentialsService to raise ObjectNotFound for undefined services and enhance test coverage for invalid credential scenarios

arash77
authored and
mvdbeek
committed
Adapt user credentials UI to backend changes

davelopez
authored and
mvdbeek
committed
Refactor ServiceCredentials prototype layout

davelopez
authored and
mvdbeek
committed
Add optional vault attribute to MockApp for enhanced flexibility

arash77
authored and
mvdbeek
committed
Format ServiceCredentials.vue

arash77
authored and
mvdbeek
committed
Refactor MinimalToolApp to include vault and install_model attributes to avoid using StructuredApp

arash77
authored and
mvdbeek
committed
Remove unused cast import from evaluation.py

arash77
authored and
mvdbeek
committed
Refactor UserCredentialsConfigurator to accept vault, session and user parameters instead of app and job, init ToolApp with install_model and vault

arash77
authored and
mvdbeek
committed
Refactor ToolApp and evaluation logic to utilize StructuredApp attributes for improved credential management

arash77
authored and
mvdbeek
committed
Redesign ManageToolCredentials UX

davelopez
authored and
mvdbeek
committed
Refactor ServiceCredentials component

davelopez
authored and
mvdbeek
committed
Add name conflict validation to ServiceCredentials component

davelopez
authored and
mvdbeek
committed
Add indicator when the user has not provided credentials for a service

davelopez
authored and
mvdbeek
committed
Fix credential validation logic in UI

davelopez
authored and
mvdbeek
committed
Refactor credential management dialog to toggle visibility and improve UX

davelopez
authored and
mvdbeek
committed
Refactor credential handling to support null values and streamline updates

arash77
authored and
mvdbeek
committed
Fix session handling in ToolEvaluator to ensure proper credential configuration

arash77
authored and
mvdbeek
committed
Adds margin-top to ToolCredentials component

itisAliRH
authored and
mvdbeek
committed
Updates credentials management modal UI

itisAliRH
authored and
mvdbeek
committed
Enhances credential set management UI

itisAliRH
authored and
mvdbeek
committed
Enhances user credentials management

itisAliRH
authored and
mvdbeek
committed
Refactor requirement parsing in multiple files to streamline credential handling

arash77
authored and
mvdbeek
committed
Remove unused computed properties and imports in ServiceCredentials and credentials services

arash77
authored and
mvdbeek
committed
Adds credential management support to tools and workflows

itisAliRH
authored and
mvdbeek
committed
Adds workflow credentials management component

itisAliRH
authored and
mvdbeek
committed
Add credentials management UI and router integration

itisAliRH
authored and
mvdbeek
committed
Improve type definitions for credentials

davelopez
authored and
mvdbeek
committed
Add useToolCredentials composable for managing tool credentials

davelopez
authored and
mvdbeek
committed
Add useUserToolCredentials composable for managing user credentials with tools

davelopez
authored and
mvdbeek
committed
Refactor useUserToolCredentials

davelopez
authored and
mvdbeek
committed
Add getServiceCredentialsDefinition

davelopez
authored and
mvdbeek
committed
Refactor user credentials handling

davelopez
authored and
mvdbeek
committed
Refactor user credentials to allow optional current group values

arash77
authored and
mvdbeek
committed
Update fetchAllUserCredentialsForTool to include toolVersion parameter

itisAliRH
authored and
mvdbeek
committed
Improves user credentials checks and anonymous handling

itisAliRH
authored and
mvdbeek
committed
Refactors credential set editing and improves UX

itisAliRH
authored and
mvdbeek
committed
Refactors credentials modal to use composable and improve UX

itisAliRH
authored and
mvdbeek
committed
Refactors credentials logic to composable, improves UX

itisAliRH
authored and
mvdbeek
committed
Adds store for managing tool credentials definitions

itisAliRH
authored and
mvdbeek
committed
Adds tool version to user credentials keying

itisAliRH
authored and
mvdbeek
committed
Update credentials composable to accept tool version

itisAliRH
authored and
mvdbeek
committed
Refactors user tool credentials to support tool versioning

itisAliRH
authored and
mvdbeek
committed
Refactors credential source transformation logic

itisAliRH
authored and
mvdbeek
committed
Refactors credential set management for tool-based sources

itisAliRH
authored and
mvdbeek
committed
Refactors tool credentials management logic for clarity

itisAliRH
authored and
mvdbeek
committed
Simplifies tool credentials prop handling

itisAliRH
authored and
mvdbeek
committed
Registers tool credentials definitions on mount

itisAliRH
authored and
mvdbeek
committed
Removes unnecessary prop for tool credentials definition in FormCard component

itisAliRH
authored and
mvdbeek
committed
Refactors user credentials access for tool-specific queries

itisAliRH
authored and
mvdbeek
committed
Refactors user credentials handling to use reactive refs

itisAliRH
authored and
mvdbeek
committed
Refactors credentials logic to use new store APIs

itisAliRH
authored and
mvdbeek
committed
Removes direct user credential management logic

itisAliRH
authored and
mvdbeek
committed
Simplifies tool credentials management logic

itisAliRH
authored and
mvdbeek
committed
Enhances credentials management by adding update functionality for user credentials and groups, refactoring related methods and data structures for improved clarity and efficiency.

arash77
authored and
mvdbeek
committed
Renames credentials component for clarity and consistency

itisAliRH
authored and
mvdbeek
committed
Fix conditional rendering for ToolCredentials component to check for non-empty credentials array

itisAliRH
authored and
mvdbeek
committed
Refactors user registration check in ensureUserIsRegistered function and removes unused currentUserId computed property

itisAliRH
authored and
mvdbeek
committed
Clears busy message after user credentials operations to improve user feedback

itisAliRH
authored and
mvdbeek
committed
Adds composable for managing multi-tool user credentials

itisAliRH
authored and
mvdbeek
committed
Adds workflow credentials management UI component

itisAliRH
authored and
mvdbeek
committed
Refactors workflow credentials management UI logic

itisAliRH
authored and
mvdbeek
committed
Refactors workflow credential handling for tool steps

itisAliRH
authored and
mvdbeek
committed
Return CredentialGroupResponse in provide credentials

davelopez
authored and
mvdbeek
committed
Refactors credential responses to distinguish variables and secrets

davelopez
authored and
mvdbeek
committed
Refines credential management with response handling

davelopez
authored and
mvdbeek
committed
Removes unused credential definition fields from response

itisAliRH
authored and
mvdbeek
committed
Refactors user credentials logic for improved service management

itisAliRH
authored and
mvdbeek
committed
Refactors credential type definitions for clarity

itisAliRH
authored and
mvdbeek
committed
Refactors user credentials logic to use new service store

itisAliRH
authored and
mvdbeek
committed
Refactors credentials sets to credentials groups UI

itisAliRH
authored and
mvdbeek
committed
Refactors user credentials response to use lists for groups and updates service logic for group handling

authored and
mvdbeek
committed
Refactors user credentials type definitions and fixes optional chaining in transformToSourceCredentials function

itisAliRH
authored and
mvdbeek
committed
Refactors tool credentials store to use a dedicated getKey function for improved readability and maintainability

itisAliRH
authored and
mvdbeek
committed
Adds API call to select current credentials group for tool

itisAliRH
authored and
mvdbeek
committed
Adds support for selecting current credentials groups

itisAliRH
authored and
mvdbeek
committed
Refactors credential group selection logic

itisAliRH
authored and
mvdbeek
committed
Refactors credentials management to support per-service group selection

itisAliRH
authored and
mvdbeek
committed
Use onBeforeMount for earlier credentials setup

itisAliRH
authored and
mvdbeek
committed
Moves credentials busy state to central store

itisAliRH
authored and
mvdbeek
committed
Improves credentials modal UI and messaging

itisAliRH
authored and
mvdbeek
committed
Add credentials group form component

itisAliRH
authored and
mvdbeek
committed
Refactors credentials group editing UI with form component

itisAliRH
authored and
mvdbeek
committed
Refactors credential reference generation logic

davelopez
authored and
mvdbeek
committed
Prevent updating credentials when no new value is provided

davelopez
authored and
mvdbeek
committed
Refactors credential group response construction

davelopez
authored and
mvdbeek
committed
Adds utility for generating tool key from ID and version

itisAliRH
authored and
mvdbeek
committed
Adds tracking for current group IDs per user tool service

itisAliRH
authored and
mvdbeek
committed
Adds interface for tool identification

itisAliRH
authored and
mvdbeek
committed
Replaces local key generator with shared utility

itisAliRH
authored and
mvdbeek
committed
Improves credentials error handling and payload usage

itisAliRH
authored and
mvdbeek
committed
Refactors multi-tool credentials composable for clarity

itisAliRH
authored and
mvdbeek
committed
Renames service group variable for clarity

itisAliRH
authored and
mvdbeek
committed
Removes anonymous user check before credential validation

itisAliRH
authored and
mvdbeek
committed
Refactors credentials group state to use Pinia store

itisAliRH
authored and
mvdbeek
committed
Refactors credentials management to support group selection

itisAliRH
authored and
mvdbeek
committed
Refactors workflow credentials logic for clarity

itisAliRH
authored and
mvdbeek
committed
Improves tool credentials handling in workflow run form

itisAliRH
authored and
mvdbeek
committed
Fix dialog recreation when reactivity changes

davelopez
authored and
mvdbeek
committed
Refactors tool credentials store for clearer service naming

itisAliRH
authored and
mvdbeek
committed
Renames and refactors user tool service credentials store

itisAliRH
authored and
mvdbeek
committed
Add extended user credentials responses and update service methods for inclusion

arash77
authored and
mvdbeek
committed
Improves credential handling for anonymous users

itisAliRH
authored and
mvdbeek
committed
Refactors credentials group selection logic for workflow

itisAliRH
authored and
mvdbeek
committed
Add extended user credentials response schemas and update operations for inclusion

arash77
authored and
mvdbeek
committed
Consolidates credential definition fields into nested object

authored and
mvdbeek
committed
Replaces manual credential types with OpenAPI types

itisAliRH
authored and
mvdbeek
committed
Adds unified fetch and computed group details for service credentials

itisAliRH
authored and
mvdbeek
committed
Prevents duplicate service credentials definitions

itisAliRH
authored and
mvdbeek
committed
Expose mutable credentials definition for consumers

itisAliRH
authored and
mvdbeek
committed
Prevents error throw when user tool service is undefined

itisAliRH
authored and
mvdbeek
committed
Add credentials group list UI with edit and delete actions

itisAliRH
authored and
mvdbeek
committed
Refactors credentials management to use service groups store

itisAliRH
authored and
mvdbeek
committed
Clarifies tools credentials management wording

itisAliRH
authored and
mvdbeek
committed
Enhances credentials service with new validation methods for credentials definition

arash77
authored and
mvdbeek
committed
Refactors credential management tests to improve group handling and validation scenarios

arash77
authored and
mvdbeek
committed
Refactors credential management to use group IDs instead of names for vault references

arash77
authored and
mvdbeek
committed
Simplify response handling in credentials API test

davelopez
authored and
mvdbeek
committed
Refactor credential validation tests to handle invalid group names and improve error handling

arash77
authored and
mvdbeek
committed
Refactor type hints in credential management and schema files to use built-in types for improved readability and consistency

arash77
authored and
mvdbeek
committed
Add vault integration tests for credentials

davelopez
authored and
mvdbeek
committed
Adds service level support for optional credentials in tools

davelopez
authored and
mvdbeek
committed
Improves form validation and error handling

itisAliRH
authored and
mvdbeek
committed
Refactors credential type definition into shared module

itisAliRH
authored and
mvdbeek
committed
Fix missing optional field in credentials definition serialization

davelopez
authored and
mvdbeek
committed
Refactors user tool credentials logic for better maintainability

itisAliRH
authored and
mvdbeek
committed
Refactors multi-tool credentials state management

itisAliRH
authored and
mvdbeek
committed
Improves service credentials UI with badges and reordering

itisAliRH
authored and
mvdbeek
committed
Improves tool credentials status messaging and logic

itisAliRH
authored and
mvdbeek
committed
Improves workflow credentials status messaging

itisAliRH
authored and
mvdbeek
committed
Adds warning badge styling with hover effects

itisAliRH
authored and
mvdbeek
committed
Removes unused tool credentials composable

itisAliRH
authored and
mvdbeek
committed
Fix secrets not being properly injected into env

davelopez
authored and
mvdbeek
committed
Handles missing user credentials gracefully

davelopez
authored and
mvdbeek
committed
Refactors vault credential reference generation

davelopez
authored and
mvdbeek
committed
Refactor move UserCredentialsConfigurator

davelopez
authored and
mvdbeek
committed
Refactor credential injection logic in ToolEvaluator

davelopez
authored and
mvdbeek
committed
Refactors user credential handling for environment variables

davelopez
authored and
mvdbeek
committed
Refactors user credentials query logic into reusable function

davelopez
authored and
mvdbeek
committed
Improves environment variable building for service credentials

davelopez
authored and
mvdbeek
committed
Ensures secrets are read from vault only if explicitly set

davelopez
authored and
mvdbeek
committed
Refactors credential handling to optimize user-set maps

arash77
authored and
mvdbeek
committed
Refactors vault reference construction to use dedicated function

arash77
authored and
mvdbeek
committed
Adds update_time field to user credentials and implements tests for its functionality

arash77
authored and
mvdbeek
committed
Enhances credential definitions to ensure unique names and inject_as_env values across variables and secrets

arash77
authored and
mvdbeek
committed
Enforces unique credentials names in requirements

davelopez
authored and
mvdbeek
committed
Improves credentials documentation in Galaxy XSD

davelopez
authored and
mvdbeek
committed
Improves modal and card layout organization

itisAliRH
authored and
mvdbeek
committed
Improves credential messaging clarity for anonymous users

itisAliRH
authored and
mvdbeek
committed
Renames temporary group creation from "new credential" to "new group" for clarity

itisAliRH
authored and
mvdbeek
committed
Removes status messages for new and editing credential groups for a cleaner UI

itisAliRH
authored and
mvdbeek
committed
Refactors data fetching logic into a separate function for improved readability and error handling

itisAliRH
authored and
mvdbeek
committed
Refactors credential loading logic into a separate function for improved error handling

itisAliRH
authored and
mvdbeek
committed
Fix prettier

davelopez
authored and
mvdbeek
committed
Adds filtering capabilities to credentials management

itisAliRH
authored and
mvdbeek
committed
Add database migration for job credentials context association table

davelopez
authored and
mvdbeek
committed
Adds JobCredentialsContextAssociation model and relationships

davelopez
authored and
mvdbeek
committed
Adds models for managing credentials context in jobs

davelopez
authored and
mvdbeek
committed
Adds support for job-specific credential contexts

davelopez
authored and
mvdbeek
committed
Adds credential context handling in tool form

davelopez
authored and
mvdbeek
committed
Adds group update_time; removes aggregate field

arash77
authored and
mvdbeek
committed
Updates API responses to use HTTP 204 for no-content success

davelopez
authored and
mvdbeek
committed
Adapt useUserToolCredentials unit tests to latests refactorings

davelopez
authored and
mvdbeek
committed
Removes duplicate method for checking user tool services

itisAliRH
authored and
mvdbeek
committed
Fix TypeScript error for missing group in template

davelopez
authored and
mvdbeek
committed
Allow null values for user credentials and group associations in job context

davelopez
authored and
mvdbeek
committed
Fix filtering logic in CredentialsManagement component to support untagged text and improve search functionality

itisAliRH
authored and
mvdbeek
committed
Adds update time display to credentials group cards

itisAliRH
authored and
mvdbeek
committed
Fix selecting current group after the service initiated for the first time

itisAliRH
authored and
mvdbeek
committed
Adds service credentials group display to tool credentials

itisAliRH
authored and
mvdbeek
committed
Displays service credential groups in workflow alerts

itisAliRH
authored and
mvdbeek
committed
Refactors user credentials related types

itisAliRH
authored and
mvdbeek
committed
Fixes modal event handler for proper close behavior

itisAliRH
authored and
mvdbeek
committed
Removes duplicate type alias for user credentials

itisAliRH
authored and
mvdbeek
committed
Unify credential modals naming for clarity

itisAliRH
authored and
mvdbeek
committed
Adds function to retrieve service credentials definition label

itisAliRH
authored and
mvdbeek
committed
Add tool credentials context validation component

itisAliRH
authored and
mvdbeek
committed
Adds credentials context check component to tool forms

itisAliRH
authored and
mvdbeek
committed
Adds credential validation to tool execution

itisAliRH
authored and
mvdbeek
committed
Add documentation to user credentials API module

itisAliRH
authored and
mvdbeek
committed
Add documentation to WorkflowCredentials component

itisAliRH
authored and
mvdbeek
committed
Add documentation to WorkflowCredentialsManagement component

itisAliRH
authored and
mvdbeek
committed
Add documentation to ToolCredentials component

itisAliRH
authored and
mvdbeek
committed
Add documentation to ToolCredentialsContextCheck component

itisAliRH
authored and
mvdbeek
committed
Add documentation to CredentialsGroupForm component

itisAliRH
authored and
mvdbeek
committed
Add documentation to CredentialsManagement component

itisAliRH
authored and
mvdbeek
committed
Add documentation to ServiceCredentials component

itisAliRH
authored and
mvdbeek
committed
Add documentation to ServiceCredentialsGroupsList component

itisAliRH
authored and
mvdbeek
committed
Add documentation to ToolCredentialsManagement component

itisAliRH
authored and
mvdbeek
committed
Add documentation to userMultiToolCredentials composable

itisAliRH
authored and
mvdbeek
committed
Add documentation to userToolCredentials composable

itisAliRH
authored and
mvdbeek
committed
Add documentation to toolsServiceCredentialsDefinitionsStore

itisAliRH
authored and
mvdbeek
committed
Add documentation to userToolsServiceCredentialsStore

itisAliRH
authored and
mvdbeek
committed
Fix badge title usage

itisAliRH
authored and
mvdbeek
committed
Remove TODO comments for ServiceCredentialGroupResponse and UserServiceCredentialsResponse classes

arash77
authored and
mvdbeek
committed
Improves credential status logic for optional tools

itisAliRH
authored and
mvdbeek
committed
Prevents workflow execution when credentials are missing

itisAliRH
authored and
mvdbeek
committed
Refactors credentials API to include user credentials ID

authored and
mvdbeek
committed
Moves workflow credentials components to organized location

itisAliRH
authored and
mvdbeek
committed
Updates API routes to use plural 'groups' for credential group endpoints

itisAliRH
authored and
mvdbeek
committed
Fix down revision
mvdbeek
committed
Removes unused BButton import from ToolCard.vue

itisAliRH
authored and
mvdbeek
committed
Renames 'editorView' prop to 'allowEditingCredentials' in ToolCard and updates usage in FormTool

itisAliRH
authored and
mvdbeek
committed
Fixes credential section rendering in tool card
itisAliRH
committed
Refactors credential display to use slots
itisAliRH
committed
Merge pull request #21019 from ahmedhamidawan/version-25.1.rc1
guerler
authored

Commits on Oct 8, 2025

Commits on Oct 9, 2025

Commits on Oct 10, 2025

Merge pull request #21026 from itisAliRH/fix-g-card-white-space
guerler
authored