Planemo not ready for Galaxy 18.01

[jmchilton]

Planemo serve with 17.09 builds this paster:

python ./scripts/paster.py serve /private/var/folders/78/zxz5mz4d0jn53xf0l06j7ppc0000gp/T/tmpdabxUz/galaxy.ini --server-name=planemo28411 --pid-file=planemo28411.pid --log-file=planemo28411.log --daemon

With 18.01 it builds this:

python ./scripts/paster.py serve /private/var/folders/78/zxz5mz4d0jn53xf0l06j7ppc0000gp/T/tmpQFqHKF/galaxy.ini --server-name=planemo87041 --pid-file=planemo87041.pid --log-file=planemo87041.log --pid-file galaxy.pid --log-file galaxy.log --daemon

And can't find the log file.

Uploads seem off:

galaxy.jobs WARNING 2018-03-01 22:51:00,461 (69) Ignoring state change from 'error' to 'running' for job that is already terminal

[jmchilton]

xref galaxyproject/galaxy@09feaf6#r27076912

[jmchilton]

Should be fixed.