Skip to content

do not consider tools with "deprecated" in the path #810

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
jmchilton merged 1 commit into from
May 6, 2018
Merged

do not consider tools with "deprecated" in the path #810

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion planemo/conda.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -76,7 +76,7 @@ def collect_conda_targets(ctx, paths, recursive=False, found_tool_callback=None)
else:
real_paths.append(path)

for (tool_path, tool_source) in yield_tool_sources_on_paths(ctx, real_paths, recursive=recursive):
for (tool_path, tool_source) in yield_tool_sources_on_paths(ctx, real_paths, recursive=recursive, exclude_deprecated=True):
if found_tool_callback:
found_tool_callback(tool_path)
for target in tool_source_conda_targets(tool_source):
Expand Down
4 changes: 3 additions & 1 deletion planemo/tools.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -30,9 +30,11 @@ def uris_to_paths(ctx, uris):
return paths


def yield_tool_sources_on_paths(ctx, paths, recursive=False, yield_load_errors=True):
def yield_tool_sources_on_paths(ctx, paths, recursive=False, yield_load_errors=True, exclude_deprecated=False):
for path in paths:
for (tool_path, tool_source) in yield_tool_sources(ctx, path, recursive, yield_load_errors):
if exclude_deprecated and 'deprecated' in tool_path:
continue
yield (tool_path, tool_source)


Expand Down
⚡