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Updating tools/obitools from version 4.4.41 to 4.4.42 (#7954) #22253

Updating tools/obitools from version 4.4.41 to 4.4.42 (#7954)

Updating tools/obitools from version 4.4.41 to 4.4.42 (#7954) #22253

Triggered via push May 4, 2026 08:14
Status Success
Total duration 12m 28s
Artifacts 5

pr.yaml

on: push
Matrix: Setup cache and determine changed repositories
Matrix: Lint tool-list
Matrix: Lint Python scripts
Matrix: Lint R scripts
Matrix: Test tools
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Matrix: Combine chunked test results
Matrix: Deploy
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Annotations

6 warnings
Lint tool-list (3.11)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: sharesight/find-github-pull-request@v1.3.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Test tools (1, 3.11)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: SimenB/github-actions-cpu-cores@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Test tools (2, 3.11)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: SimenB/github-actions-cpu-cores@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Test tools (0, 3.11)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: SimenB/github-actions-cpu-cores@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Test tools (3, 3.11)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: SimenB/github-actions-cpu-cores@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Report deploy status
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: 8BitJonny/gh-get-current-pr@4.0.0. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Artifacts

Produced during runtime
Name Size Digest
All tool test results
114 KB
sha256:c84b15ee6856634907207c67c49fe9b6cab84fe3e4bb5914f3721b2f029580ae
Tool test output 0
99.8 KB
sha256:38e5e44f7afe13df31b750e9308d8bad5eced07bab0196120a2fc8a3cb02e739
Tool test output 1
97.7 KB
sha256:3c2b6870c16fb8d1f4e34e23cade1cf0da6ab52cf31262b0dc7ca3b7e1ceb412
Tool test output 2
98.8 KB
sha256:ef126e436adc50317d6da4e1f603c4a9663c68caf86c884720f1be1f7414cb3b
Tool test output 3
97.6 KB
sha256:4ab0a39785ef35018d6a8396ac95b12b0d92d236eabb669c69fd7522be7149f6