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Pull requests: galaxyproject/tools-iuc

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363 Open 6,193 Closed
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Pull requests list

Updating tools/rasusa from version 4.0.0 to 4.1.0
#7955 opened May 4, 2026 by gxydevbot Collaborator Loading…
Updating tools/kmer2stats from version 1.0.1 to 1.0.2
#7952 opened May 4, 2026 by gxydevbot Collaborator Loading…
Update wfmash and test data
#7950 opened Apr 30, 2026 by RZ9082 Member Loading…
2 of 5 tasks
2
Fix: Prevent duplicate AMRFinderPlus database paths
#7949 opened Apr 30, 2026 by jakobnissen Contributor Loading…
3 of 5 tasks
IDR download: fix linter issues
#7944 opened Apr 28, 2026 by bernt-matthias Contributor Loading…
5 tasks
Updating tools/irma from version 1.2.0 to 1.3.2
#7928 opened Apr 27, 2026 by gxydevbot Collaborator Loading…
1
Updating tools/iqtree from version 2.4.0 to 3.1.1
#7927 opened Apr 27, 2026 by gxydevbot Collaborator Loading…
Add MAGs-visualization Galaxy wrappers
#7922 opened Apr 26, 2026 by alexandrah1704 Loading…
3 of 5 tasks
37
Taxonomic Update for obitools4 skip-version-check Allow IUC members to skip the version linter in PR reviews (use only for partially updated suites).
#7921 opened Apr 24, 2026 by kpayet26 Contributor Loading…
4 of 5 tasks
13
New tool: TSENAT v.0.99.0
#7916 opened Apr 21, 2026 by gallardoalba Contributor • Draft
5 tasks done
Compleasm: use busco_database_options for lineages instead of hardcoded ones
#7915 opened Apr 21, 2026 by Delphine-L Contributor Loading…
3 of 5 tasks
6
New tool addition: Alnchain
#7911 opened Apr 20, 2026 by as042 Contributor Loading…
3 of 5 tasks
21
Odgi update
#7903 opened Apr 17, 2026 by mirelaminkova Contributor • Draft
17
ncbi_datasets: Update taxonomy help text
#7901 opened Apr 17, 2026 by SaimMomin12 Contributor Loading…
3 of 5 tasks
1
9
Add Trackastra-Galaxy to perform object tracking with Trackastra
#7893 opened Apr 14, 2026 by khaled196 Contributor Loading…
2 of 5 tasks
47
Update spade for single file processing
#7876 opened Apr 10, 2026 by SantaMcCloud Contributor Loading…
3 of 5 tasks
4
Update chewbbaca with manual species ID
#7870 opened Apr 9, 2026 by nilchia Collaborator Loading…
3 of 5 tasks
1
18
Add MAGmax
#7869 opened Apr 8, 2026 by SantaMcCloud Contributor Loading…
3 of 5 tasks
5
Scanpy read anndata in backed mode to reduce memory consumption
#7852 opened Apr 1, 2026 by pavanvidem Member • Draft
3 of 5 tasks
Update FreeBayes parameters for nf-core/eager compatibility
#7850 opened Mar 30, 2026 by mertydn Contributor Loading…
36
Updating tools/mmseqs2 from version 17-b804f to 16.747c6
#7844 opened Mar 30, 2026 by gxydevbot Collaborator Loading…
Update FastQC/Falco wrappers to make output of pairs compatible with multiQC
#7839 opened Mar 27, 2026 by lldelisle Contributor Loading…
5 tasks
43
make it pgxRpi a suite
#7830 opened Mar 25, 2026 by bgruening Member Loading…
5 tasks
Fix and update the omamer DM
#7828 opened Mar 24, 2026 by bernt-matthias Contributor Loading…
3 of 5 tasks
1
1
Update Liana resource tools set with access to data managers for cached data, and fix the get_metalinks API
#7827 opened Mar 24, 2026 by khaled196 Contributor Loading…
1 of 5 tasks
3
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