Merge pull request #7938 from RZ9082/king

Updating tools/king from version 2.2.7 to 2.3.2

Author: bgruening

tools/king/king.xml

@@ -2,14 +2,14 @@
 <tool id="king" name="KING" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
     <description>Kinship-based INference for GWAS</description>
     <macros>
-        <token name="@TOOL_VERSION@">2.2.7</token>
+        <token name="@TOOL_VERSION@">2.3.2</token>
         <token name="@VERSION_SUFFIX@">0</token>
     </macros>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">king</requirement>
-        <requirement type="package" version="1.8.5">r-kinship2</requirement>
-        <requirement type="package" version="1.3.0">r-igraph</requirement>
-        <requirement type="package" version="1.7_9">r-e1071</requirement>
+        <requirement type="package" version="1.9.6.2">r-kinship2</requirement>
+        <requirement type="package" version="2.3.0">r-igraph</requirement>
+        <requirement type="package" version="1.7_17">r-e1071</requirement>
     </requirements>
     <version_command>
         king | head -1 | cut -d' ' -f 2
@@ -462,7 +462,7 @@
             <param name="use_log" value="true" />
             <output name="kingoutlog">
                 <assert_contents>
-                    <has_text text="Autosome genotypes stored in 375 words for each of 332 individuals." />
+                    <has_text text="Autosome genotypes stored in 94 words for each of 332 individuals." />
                     <has_text text="--homo" />
                     <has_text text="Within-family kinship data saved in file king.kin" />
                     <has_text text="Genotype data consist of 6000 autosome SNPs" />
@@ -591,7 +591,7 @@
             <output_collection name="kingoutput_txt" count="1">
                 <element name="grs" >
                     <assert_contents>
-                        <has_text text="13292         NA07014   1.000   1.000   4.917   3.243  0.0006    0.9927" />
+                        <has_text text="13292         NA07014   1.000   1.000   5.296   3.493  0.0002    0.9950" />
                     </assert_contents>
                 </element>
             </output_collection>