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tools/tiberius/tiberius.xml

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deep learning-based ab initio gene structure prediction tool.
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It predicts genes from genomic sequence only.
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To run Tiberius, you need to provide a FASTA file containing
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the genomic sequences and choose a pre-trained model.
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More information about the models is available on the
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Tiberius GitHub
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`page <https://github.com/Gaius-Augustus/Tiberius/tree/main/model_cfg>`__
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Tiberius end-to-end integrates convolutional and
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long short-term memory layers with a differentiable HMM layer.
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It can be used to predict gene structures from genomic
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sequences only (ab initio), while matching the accuracy of
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tools that use extrinsic evidence.
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]]></help>
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<expand macro="citation"/>
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</tool>

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