Bump actions/upload-artifact from 6 to 7 (#7735)

Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 6 to 7.
- [Release notes](https://github.com/actions/upload-artifact/releases)
- [Commits](actions/upload-artifact@v6...v7)

---
updated-dependencies:
- dependency-name: actions/upload-artifact
  dependency-version: '7'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

Author: dependabot[bot]

.github/workflows/ci.yaml

@@ -105,7 +105,7 @@ jobs:
         repository-list: ${{ needs.setup.outputs.repository-list }}
         tool-list: ${{ needs.setup.outputs.tool-list }}
         additional-planemo-options: --biocontainers --skip version_bumped
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       if: ${{ failure() }}
       with:
         name: 'Tool linting output'
@@ -162,7 +162,7 @@ jobs:
         galaxy-slots: ${{ steps.cpu-cores.outputs.count }}
         # Limit each test to 15 minutes
         test_timeout: 900
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       with:
         name: 'Tool test output ${{ matrix.chunk }}'
         path: upload
@@ -200,7 +200,7 @@ jobs:
         mode: combine
         html-report: true
         markdown-report: true
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       with:
         name: 'All tool test results'
         path: upload

.github/workflows/pr.yaml

@@ -167,7 +167,7 @@ jobs:
         repository-list: ${{ needs.setup.outputs.repository-list }}
         tool-list: ${{ needs.setup.outputs.tool-list }}
         additional-planemo-options: ${{ env.EXTRA_SKIP }}
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       if: ${{ failure() }}
       with:
         name: 'Tool linting output'
@@ -200,7 +200,7 @@ jobs:
       run: pip install flake8 flake8-import-order
     - name: Flake8
       run: echo '${{ needs.setup.outputs.repository-list }}' | xargs -d '\n' flake8 --output-file pylint_report.txt --tee
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       if: ${{ failure() }}
       with:
         name: 'Python linting output'
@@ -239,7 +239,7 @@ jobs:
         echo '${{ needs.setup.outputs.repository-list }}' | xargs -d '\n' -n 1 ./.github/styler.R --dry off
         git status
         git diff --exit-code | tee rlint_report.txt
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       if: ${{ failure() }}
       with:
         name: 'R linting output'
@@ -267,7 +267,7 @@ jobs:
           cat file_size_report.txt
           exit 1
         fi
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       if: ${{ failure() }}
       with:
         name: 'File size report'
@@ -331,7 +331,7 @@ jobs:
         galaxy-slots: ${{ steps.cpu-cores.outputs.count }}
         # Limit each test to 15 minutes
         test_timeout: 900
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       with:
         name: 'Tool test output ${{ matrix.chunk }}'
         path: upload
@@ -369,7 +369,7 @@ jobs:
         mode: combine
         html-report: true
         markdown-report: true
-    - uses: actions/upload-artifact@v6
+    - uses: actions/upload-artifact@v7
       with:
         name: 'All tool test results'
         path: upload