Skip to content

NoRouteToHostException error from annotate_vep_mnv.py #3

@ansontcw

Description

@ansontcw

Hello,

I am trying to annotate the hail table after running get_mnv.py on a vcf, but hail gives an error as follow:

hail.utils.java.FatalError: NoRouteToHostException: No route to host (Host unreachable)

May I know if it means the vep config file cannot be accessed?
The config file specified in the script is:
vep_config = "gs://gnomad-resources/loftee-beta/vep85-loftee-gcloud.json"

I also tried using another config file specified here, yet the same error popped out:
vep_config = "gs://hail-us-vep/vep85-loftee-gcloud.json"

Looking forward to your advice. Thank you!

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions