java.lang.Throwable: Invalid root

[ofry]

IntelliJ IDEA 2018.3.5 (Ultimate Edition)
Build #IU-183.5912.21, built on February 26, 2019

JRE: 1.8.0_152-release-1343-b28 amd64
JVM: OpenJDK 64-Bit Server VM by JetBrains s.r.o
KUbuntu 18.10 64-bit

DataWeave 2.0. v2.0.9

java.lang.Throwable: Invalid root phar:///home/ofryak/IdeaProjects/(drupal 8 site)/core/modules/simpletest/files/phar-1.phar/ in com.jetbrains.php.config.library.PhpSyntheticLibrary@b8e7c6
	at com.intellij.openapi.diagnostic.Logger.error(Logger.java:134)
	at com.intellij.openapi.roots.impl.RootIndex.ensureValid(RootIndex.java:249)
	at com.intellij.openapi.roots.impl.RootIndex.buildRootInfo(RootIndex.java:180)
	at com.intellij.openapi.roots.impl.RootIndex.<init>(RootIndex.java:61)
	at com.intellij.openapi.roots.impl.DirectoryIndexImpl.getRootIndex(DirectoryIndexImpl.java:98)
	at com.intellij.openapi.roots.impl.DirectoryIndexImpl.getInfoForFile(DirectoryIndexImpl.java:111)
	at com.intellij.openapi.roots.impl.FileIndexBase.getInfoForFileOrDirectory(FileIndexBase.java:85)
	at com.intellij.openapi.roots.impl.ProjectFileIndexImpl.getModuleForFile(ProjectFileIndexImpl.java:94)
	at com.intellij.openapi.roots.impl.ProjectFileIndexImpl.getModuleForFile(ProjectFileIndexImpl.java:87)
	at com.intellij.openapi.module.ModuleUtilCore.findModuleForFile(ModuleUtilCore.java:70)
	at org.mule.tooling.lang.dw.service.WeaveRuntimeContextManager.onFileChanged(WeaveRuntimeContextManager.java:155)
	at org.mule.tooling.lang.dw.service.WeaveRuntimeContextManager.access$100(WeaveRuntimeContextManager.java:52)
	at org.mule.tooling.lang.dw.service.WeaveRuntimeContextManager$2.fileDeleted(WeaveRuntimeContextManager.java:129)
	at sun.reflect.GeneratedMethodAccessor733.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at com.intellij.util.EventDispatcher.dispatchVoidMethod(EventDispatcher.java:133)
	at com.intellij.util.EventDispatcher.access$100(EventDispatcher.java:25)
	at com.intellij.util.EventDispatcher$3.invoke(EventDispatcher.java:96)
	at com.sun.proxy.$Proxy24.fileDeleted(Unknown Source)
	at com.intellij.openapi.vfs.impl.BulkVirtualFileListenerAdapter.fireAfter(BulkVirtualFileListenerAdapter.java:85)
	at com.intellij.openapi.vfs.impl.BulkVirtualFileListenerAdapter.after(BulkVirtualFileListenerAdapter.java:56)
	at sun.reflect.GeneratedMethodAccessor190.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at com.intellij.util.messages.impl.MessageBusConnectionImpl.deliverMessage(MessageBusConnectionImpl.java:117)
	at com.intellij.util.messages.impl.MessageBusImpl.doPumpMessages(MessageBusImpl.java:397)
	at com.intellij.util.messages.impl.MessageBusImpl.pumpWaitingBuses(MessageBusImpl.java:358)
	at com.intellij.util.messages.impl.MessageBusImpl.pumpMessages(MessageBusImpl.java:347)
	at com.intellij.util.messages.impl.MessageBusImpl.sendMessage(MessageBusImpl.java:324)
	at com.intellij.util.messages.impl.MessageBusImpl.access$200(MessageBusImpl.java:29)
	at com.intellij.util.messages.impl.MessageBusImpl$2.invoke(MessageBusImpl.java:196)
	at com.sun.proxy.$Proxy22.after(Unknown Source)
	at com.intellij.openapi.vfs.newvfs.persistent.PersistentFSImpl.processEvents(PersistentFSImpl.java:890)
	at com.intellij.openapi.vfs.newvfs.RefreshSessionImpl.fireEventsInWriteAction(RefreshSessionImpl.java:198)
	at com.intellij.openapi.application.WriteAction.run(WriteAction.java:106)
	at com.intellij.openapi.vfs.newvfs.RefreshSessionImpl.fireEvents(RefreshSessionImpl.java:185)
	at com.intellij.openapi.application.TransactionGuardImpl.runSyncTransaction(TransactionGuardImpl.java:88)
	at com.intellij.openapi.application.TransactionGuardImpl.lambda$submitTransaction$1(TransactionGuardImpl.java:111)
	at com.intellij.openapi.application.impl.LaterInvocator$FlushQueue.doRun(LaterInvocator.java:435)
	at com.intellij.openapi.application.impl.LaterInvocator$FlushQueue.runNextEvent(LaterInvocator.java:419)
	at com.intellij.openapi.application.impl.LaterInvocator$FlushQueue.run(LaterInvocator.java:403)
	at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:311)
	at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:762)
	at java.awt.EventQueue.access$500(EventQueue.java:98)
	at java.awt.EventQueue$3.run(EventQueue.java:715)
	at java.awt.EventQueue$3.run(EventQueue.java:709)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:80)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:732)
	at com.intellij.ide.IdeEventQueue.defaultDispatchEvent(IdeEventQueue.java:719)
	at com.intellij.ide.IdeEventQueue._dispatchEvent(IdeEventQueue.java:668)
	at com.intellij.ide.IdeEventQueue.dispatchEvent(IdeEventQueue.java:363)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:201)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)

[machaval]

Are you using DataWeave plugin in phpstorme? I haven't tested this. Do you have any steps to reproduce this?

[ofry]

No, it isn't PHPStorm. It's IntelliJ IDEA with PHP plugin.

Sorry, I have not any additional info, because this plugin was just enabled, not actively used.