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Update Apptainer cache directory path#965

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CodingKaiser wants to merge 1 commit intonf-core:masterfrom
CodingKaiser:patch-1
Open

Update Apptainer cache directory path#965
CodingKaiser wants to merge 1 commit intonf-core:masterfrom
CodingKaiser:patch-1

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@CodingKaiser
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name: New Config
about: A new cluster config

Please follow these steps before submitting your PR:

  • If your PR is a work in progress, include [WIP] in its title
  • Your PR targets the master branch
  • You've included links to relevant issues, if any

Steps for adding a new config profile:

  • Add your custom config file to the conf/ directory
  • Add your documentation file to the docs/ directory
  • Add your custom profile to the nfcore_custom.config file in the top-level directory
  • Add your profile name to the profile: scope in .github/workflows/main.yml
  • OPTIONAL: Add your custom profile path and GitHub user name to .github/CODEOWNERS (**/<custom-profile>** @<github-username>)

@pontus
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pontus commented Oct 17, 2025

If you haven't received it before, here's your "mandatory" warning that having a system wide image cachedir is generally not a good idea for larger clusters (basically, it makes anyone running nf-core pipelines with that profile fully trust everyone else on the system enough to run their code as themselves).

Using a libraryDir that's managed by a trusted set of users is generally a much better idea.

@maxulysse
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@CodingKaiser has this one been tested, and is it ok to merge?

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4 participants