This will be useful for future training and new people coming in after posting of the print. Topics: - [x] How to contribute a new module (maybe we can write this along side bowtie2? @apeltzer ) - [x] How to run for human data (shotgun, snpCapture) - [ ] How to run for pathogen data (phylogenies, functional stuff) - [x] How to run for microbiome work data (off-target profiling, ) - [x] How to use profiles (and make custom ones that can be shared for publication <- noting inheritance rules)
This will be useful for future training and new people coming in after posting of the print.
Topics: