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modules.json
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161 lines (161 loc) · 7.21 KB
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{
"name": "ecoflow/genomeqc",
"homePage": "https://github.com/ecoflow/genomeqc",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"agat/convertspgxf2gxf": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"agat/spkeeplongestisoform": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"agat/spstatistics": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"busco/busco": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"fcs/fcsadaptor": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"fcsgx/cleangenome": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"fcsgx/fetchdb": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"fcsgx/rungx": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"gawk": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"gffread": {
"branch": "master",
"git_sha": "c9ad4d691aa339e478a77847e3ef854ccd21778b",
"installed_by": ["modules"]
},
"merqury/merqury": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"meryl/count": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"meryl/unionsum": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "008f9d3e61209bf995edac3ba531f54e269e1215",
"installed_by": ["modules"]
},
"ncbigenomedownload": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"orthofinder": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"pigz/uncompress": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"quast": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"seqkit/seq": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["fasta_explore_search_plot_tidk"]
},
"seqkit/sort": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["fasta_explore_search_plot_tidk"]
},
"tiara/tiara": {
"branch": "master",
"git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
"installed_by": ["modules"]
},
"tidk/explore": {
"branch": "master",
"git_sha": "963a017f3fdc807828837f2f7f66e2e152901403",
"installed_by": ["fasta_explore_search_plot_tidk"]
},
"tidk/plot": {
"branch": "master",
"git_sha": "963a017f3fdc807828837f2f7f66e2e152901403",
"installed_by": ["fasta_explore_search_plot_tidk"]
},
"tidk/search": {
"branch": "master",
"git_sha": "963a017f3fdc807828837f2f7f66e2e152901403",
"installed_by": ["fasta_explore_search_plot_tidk"]
}
}
},
"subworkflows": {
"nf-core": {
"fasta_explore_search_plot_tidk": {
"branch": "master",
"git_sha": "963a017f3fdc807828837f2f7f66e2e152901403",
"installed_by": ["subworkflows"]
},
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "a3fb7351b1fdb2b1de282b765816bbea190e86a8",
"installed_by": ["subworkflows"]
},
"utils_nfschema_plugin": {
"branch": "master",
"git_sha": "fdc08b8b1ae74f56686ce21f7ea11ad11990ce57",
"installed_by": ["subworkflows"]
}
}
}
}
}
}