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Adapt code in favour of static typing

enhancementNew feature or requestNew feature or request

Status: Open.

#212 In nf-core/genomeqc;

· FernandoDuarteF opened on May 7, 2026

Instructions for how to use shiny app

enhancementNew feature or requestNew feature or request

Status: Open.

#210 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 28, 2026

Make sure tree summary and shiny app modules are using the same container

Status: Open.

#208 In nf-core/genomeqc;

· FernandoDuarteF opened on Apr 24, 2026

Reduce memory reuqirement on fcs gx rungx

bugSomething isn't workingSomething isn't working

Status: Open.

#206 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 20, 2026

Deprecated modules

Status: Open.

#204 In nf-core/genomeqc;

· FernandoDuarteF opened on Apr 20, 2026

No instructions for fcs

bugSomething isn't workingSomething isn't working

Status: Open.

#203 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 19, 2026

Add a test for GCA input

enhancementNew feature or requestNew feature or request

Status: Open.

#202 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 11, 2026

DOGMA

enhancementNew feature or requestNew feature or request

Status: Open.

#201 In nf-core/genomeqc;

· Alex-cdea opened on Mar 24, 2026

Add a pipeline level test of the pipeline

enhancementNew feature or requestNew feature or request

Status: Open.

#199 In nf-core/genomeqc;

· chriswyatt1 opened on Mar 23, 2026

Change ORTHOLOGOUS_CHROMOSOMES name

Status: Open.

#196 In nf-core/genomeqc;

· FernandoDuarteF opened on Mar 20, 2026

Move modules into subworkflows

Status: Open.

#192 In nf-core/genomeqc;

· FernandoDuarteF opened on Mar 16, 2026

Add the new version 3 orthofinder to pipeline

enhancementNew feature or requestNew feature or request

Status: Open.

#190 In nf-core/genomeqc;

· chriswyatt1 opened on Mar 10, 2026