Extra columns fix#130
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kbestak merged 5 commits intonf-core:devfrom Nov 18, 2025
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I've added that
SPOT2CELLandMOLKARTQCcan accept inputs with additional columns, as long as the first four are stillx,y,z,gene(still without header and tab-separated). This was done to account for optional columns in newly created Molecular Cartography data. Skipping Mindagap with such a table was causing the pipeline to not be usable. Added the appropriate test.Fixes: #122
PR checklist
nf-core pipelines lint).nextflow run . -profile test,docker --outdir <OUTDIR>).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).