Skip to content

fix download cache script + further improvements#141

Merged
maxulysse merged 19 commits intonf-core:devfrom
maxulysse:More2.6Preparation
Mar 4, 2020
Merged

fix download cache script + further improvements#141
maxulysse merged 19 commits intonf-core:devfrom
maxulysse:More2.6Preparation

Conversation

@maxulysse
Copy link
Copy Markdown
Member

@maxulysse maxulysse commented Mar 4, 2020

nf-core/sarek pull request

  • Fix download_cache.nf script (close Fix VEP CI tests #137)
  • Update snpeff and vep database to latest versions
  • Add container for WBcel235
  • Try CI tests for annotation with WBcel235

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • If necessary, also make a PR on the nf-core/sarek branch on the nf-core/test-datasets repo
  • Ensure the test suite passes (nextflow run . -profile test,docker).
  • Make sure your code lints (nf-core lint .).
  • Documentation in docs is updated
  • CHANGELOG.md is updated
  • README.md is updated

Learn more about contributing: CONTRIBUTING.md

@maxulysse maxulysse self-assigned this Mar 4, 2020
@maxulysse maxulysse added the enhancement New feature or request label Mar 4, 2020
@maxulysse maxulysse marked this pull request as ready for review March 4, 2020 16:18
@maxulysse maxulysse requested a review from a team March 4, 2020 16:31
Copy link
Copy Markdown
Member

@ggabernet ggabernet left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM :)

@maxulysse maxulysse merged commit dd2a0ac into nf-core:dev Mar 4, 2020
@maxulysse maxulysse deleted the More2.6Preparation branch March 4, 2020 16:51
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

enhancement New feature or request

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants