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specify some channels to solve the conda env faster#290

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maxulysse merged 1 commit intonf-core:devfrom
maxulysse:dev_docker
Oct 7, 2020
Merged

specify some channels to solve the conda env faster#290
maxulysse merged 1 commit intonf-core:devfrom
maxulysse:dev_docker

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conda env solving was too slow.

Solving environment: ...working...
Warning: 2 possible package resolutions (only showing differing packages):
- conda-forge/linux-64::llvm-openmp-8.0.1-hc9558a2_0, conda-forge/linux-64::openmp-8.0.1-0
- conda-forge/linux-64::openmp-7.0.0-h2d50403_0, conda-forge/noarch::llvm-meta-7.0.0-0

Asking for the first resolution from the start seems to speed up the process a bit.

nf-core/sarek pull request

Many thanks for contributing to nf-core/sarek!

Please fill in the appropriate checklist below (delete whatever is not relevant).
These are the most common things requested on pull requests (PRs).

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • If necessary, also make a PR on the nf-core/sarek branch on the nf-core/test-datasets repo
  • Ensure the test suite passes (nextflow run . -profile test,docker).
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@maxulysse maxulysse requested a review from a team October 6, 2020 13:24
@maxulysse maxulysse merged commit 0e111eb into nf-core:dev Oct 7, 2020
@maxulysse maxulysse deleted the dev_docker branch October 7, 2020 14:30
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2 participants