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5 changes: 3 additions & 2 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -18,8 +18,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#464](https://github.com/nf-core/sarek/pull/464), [#514](https://github.com/nf-core/sarek/pull/514) - Add `DRAGMAP` as a possible aligner
- [#479](https://github.com/nf-core/sarek/pull/479) - Add more subworkflows
- [#485](https://github.com/nf-core/sarek/pull/485) - `--skip_qc`, `--skip_markduplicates` and `--skip_bqsr` is now `--skip_tools`
- [#507](https://github.com/nf-core/sarek/pull/507) - Subway map for building indexes
- [#512](https://github.com/nf-core/sarek/pull/512) - Subway map for pipeline
- [#507](https://github.com/nf-core/sarek/pull/507), [#537](https://github.com/nf-core/sarek/pull/537) - Subway map for building indexes
- [#512](https://github.com/nf-core/sarek/pull/512), [#531](https://github.com/nf-core/sarek/pull/531), [#537](https://github.com/nf-core/sarek/pull/537) - Subway map for pipeline
- [#522](https://github.com/nf-core/sarek/pull/522) - Add QC for vcf files & MultiQC

### Changed
Expand All @@ -42,6 +42,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#501](https://github.com/nf-core/sarek/pull/501) - Sync `TEMPLATE` with `tools` `2.3`
- [#511](https://github.com/nf-core/sarek/pull/511) - Sync `TEMPLATE` with `tools` `2.3.2`
- [#520](https://github.com/nf-core/sarek/pull/520) - Improve annotation subworkflows
- [#537](https://github.com/nf-core/sarek/pull/537) - Update workflow figure

### Fixed

Expand Down
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253 changes: 229 additions & 24 deletions docs/images/sarek_indices_subway.svg
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243 changes: 221 additions & 22 deletions docs/images/sarek_subway.svg
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82 changes: 61 additions & 21 deletions docs/images/sarek_workflow.svg
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