TRUNK-5731: Ensure the Lucene index is upgraded

[jwnasambu]

Description of what I changed

I moved OpenmrsUtil.startup(props) and getContextDAO().setupSearchIndex() to execute before the version change
check and Liquibase update (runCoreSetupOnVersionChange()). This ensures that the Lucene search index is properly initialized and upgraded to the current version's format before any Liquibase changes run, which might otherwise trigger Hibernate Search with an outdated index.

Issue I worked on

https://openmrs.atlassian.net/issues?filter=10641&selectedIssue=TRUNK-5731

Checklist: I completed these to help reviewers :)

• My IDE is configured to follow the code style of this project.

  No? Unsure? -> configure your IDE, format the code and add the changes with git add . && git commit --amend

• I have added tests to cover my changes. (If you refactored
  existing code that was well tested you do not have to add tests)

  No? -> write tests and add them to this commit git add . && git commit --amend

• I ran mvn clean package right before creating this pull request and
  added all formatting changes to my commit.

  No? -> execute above command

• All new and existing tests passed.

  No? -> figure out why and add the fix to your commit. It is your responsibility to make sure your code works.

• My pull request is based on the latest changes of the master branch.

  No? Unsure? -> execute command git pull --rebase upstream master

[codecov-commenter]

Codecov Report

❌ Patch coverage is 89.36170% with 5 lines in your changes missing coverage. Please review.
✅ Project coverage is 59.40%. Comparing base (0a6d15c) to head (7d31fee).

Files with missing lines	Patch %	Lines
...eb/filter/initialization/InitializationFilter.java	93.33%	1 Missing and 2 partials ⚠️
...src/main/java/org/openmrs/api/context/Context.java	0.00%	2 Missing ⚠️

Additional details and impacted files

@@             Coverage Diff              @@
##             master    #6157      +/-   ##
============================================
+ Coverage     59.31%   59.40%   +0.09%     
- Complexity     9335     9343       +8     
============================================
  Files           695      695              
  Lines         37460    37462       +2     
  Branches       5517     5518       +1     
============================================
+ Hits          22219    22256      +37     
+ Misses        13242    13195      -47     
- Partials       1999     2011      +12     

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[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud