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@CPTPGenomicTranscriptomic Infinity - Genomic and Transcriptomic Platform

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    19 repositories

    • msisensor

      Public
      microsatellite instability detection using tumor only or paired tumor-normal data
      C++
      •
      MIT License
      •55•0•0•0•Updated Oct 20, 2020Oct 20, 2020

    • cytofkit2

      Public
      R
      •15•0•0•0•Updated Feb 25, 2020Feb 25, 2020

    • ShinyFlowClean

      Public
      Clean cytometry data using FlowClean R package through a Rshiny interface.
      R
      •0•0•0•0•Updated Feb 25, 2020Feb 25, 2020

    • OpenCyto

      Public
      R/shiny interface for Automated Flow Data Analysis
      R
      •0•0•0•0•Updated Feb 4, 2020Feb 4, 2020

    • UTechSCB-SCHNAPPs

      Public
      Shiny app for the analysis of single cell data
      R
      •3•0•0•0•Updated Jan 10, 2020Jan 10, 2020

    • idep

      Public
      Integrated Differential Expression and Pathway analysis
      R
      •63•0•0•0•Updated Nov 14, 2019Nov 14, 2019

    • FlowAIAll

      Public
      Clean cytometry data using FlowAI R package through a new Rshiny interface
      R
      •0•0•0•0•Updated Oct 23, 2019Oct 23, 2019

    • cytofkit

      Public
      cytofkit: an integrated flow/mass cytometry data analysis pipeline
      R
      •27•0•0•0•Updated Sep 17, 2019Sep 17, 2019

    • ISEE

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Aug 26, 2019Aug 26, 2019

    • shinyheatmap

      Public
      Web application for enormous biological heatmaps
      R
      •
      GNU General Public License v3.0
      •23•0•0•0•Updated Jul 9, 2019Jul 9, 2019

    • Gene-Attributes-Multiple

      Public
      A shiny app that obtains Ensembl gene ID, gene names, the coordinates and description of multiple input files using biomaRt package.
      R
      •0•0•0•0•Updated Jun 18, 2019Jun 18, 2019

    • Gene-Attributes

      Public
      A shiny app that obtains Ensembl gene ID, gene names, the coordinates and description of an input file using biomaRt package.
      R
      •3•0•0•0•Updated May 29, 2019May 29, 2019

    • TCC-GUI

      Public
      📊Graphical User Interface for TCC package
      R
      •
      MIT License
      •17•0•0•0•Updated May 17, 2019May 17, 2019

    • ReorderColumnsMultiple

      Public
      Reorder the columns of multiple files using one file as template.
      R
      •0•0•0•0•Updated May 14, 2019May 14, 2019

    • 3DtSNE

      Public
      A Shiny app to explore t-SNE representation
      R
      •0•0•0•0•Updated Apr 24, 2019Apr 24, 2019

    • RemoveDuplicatedCells

      Public
      Remove duplicated cells
      R
      •0•0•0•0•Updated Apr 19, 2019Apr 19, 2019

    • shinyCircos

      Public
      an R/shiny application for creation of Circos plot interactively
      HTML
      •47•0•0•0•Updated Apr 11, 2019Apr 11, 2019

    • ezSingleCell

      Public
      GUI implementation for Seurat using shiny
      R
      •3•0•0•0•Updated Nov 24, 2017Nov 24, 2017

    • Interactive_PCA_Explorer

      Public
      Shiny app for exploring a PCA
      R
      •33•0•0•0•Updated Sep 8, 2016Sep 8, 2016
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