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@Chaste Chaste - Cancer Heart and Soft Tissue Environment

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    63 repositories

    • OpenVT

      Public
      OpenVT reference model implementations in Chaste
      C++
      •
      Other
      •0•0•0•0•Updated Apr 8, 2026Apr 8, 2026

    • cppwg

      Public
      An automatic Python wrapper generator for C++ code.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •9•51•7•0•Updated Mar 31, 2026Mar 31, 2026

    • chaste-docker

      Public
      Docker images for Chaste
      windowsmacoslinux
      windowsmacoslinuxdockerdockerfilesimulationdocker-containerdocker-imagechaste
      Dockerfile
      •
      MIT License
      •10•13•8•1•Updated Mar 31, 2026Mar 31, 2026

    • chaste-codegen-sbml

      Public
      Chaste C++ code generation from SBML
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•9•1•Updated Mar 31, 2026Mar 31, 2026

    • memory-testing

      Public
      Generated files from the memory testing CI
      HTML
      •0•0•0•0•Updated Mar 24, 2026Mar 24, 2026

    • profiling-gprof

      Public
      Generated files from profiling with GProf on CI
      HTML
      •0•0•0•0•Updated Mar 24, 2026Mar 24, 2026

    • Chaste

      Public
      Chaste - Cancer Heart And Soft Tissue Environment - main public repository.
      c-plus-pluscomputational-biologyelectrophysiology
      c-plus-pluscomputational-biologyelectrophysiologymathematical-modellinghpc-applicationscancer-researchmathematical-biologydevelopmental-biologycell-basedphysiology
      C++
      •
      Other
      •71•144•65•12•Updated Mar 24, 2026Mar 24, 2026

    • doxygen-latest

      Public
      GitHub pages site containing doxygen generated from the latest commit on develop
      HTML
      •0•0•0•0•Updated Feb 16, 2026Feb 16, 2026

    • ApPredict

      Public
      Cardiac Action Potential Prediction (ApPredict) under drug-induced block of ion channels. This is a Chaste extension/bolt-on project.
      drug-discoveryelectrophysiologymathematical-modelling
      drug-discoveryelectrophysiologymathematical-modellingbiophysicscardiacion-channelchastedrug-safety
      C++
      •
      Other
      •5•8•2•0•Updated Dec 16, 2025Dec 16, 2025

    • cellml

      Public
      Some copies of cellml.org electrophysiology models with metadata annotations for use with Chaste, ApPredict and WebLab
      4•9•1•0•Updated Dec 3, 2025Dec 3, 2025

    • OpenVtMonolayer

      Public
      Project for the Open VT Monolayer exemplar.
      C++
      •0•0•0•0•Updated Dec 1, 2025Dec 1, 2025

    • dependency-modules

      Public
      Environment modules for Chaste dependencies
      Shell
      •
      Other
      •0•1•6•0•Updated Nov 24, 2025Nov 24, 2025

    • chaste-workshop-materials-2025

      Public
      Materials for the 2025 Chaste workshop in Nottingham
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Oct 15, 2025Oct 15, 2025

    • PerMedCoE

      Public
      PerMedCoE community benchmarking code for the Chaste project
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Sep 30, 2025Sep 30, 2025

    • OpenVtPersistentRandomWalk

      Public
      Repo for the Persistent Random walk exemplar from the Open VT project
      C++
      •0•1•1•0•Updated Aug 30, 2025Aug 30, 2025

    • chaste-smb-workshop-materials-2025

      Public
      Materials for the 2025 Chaste tutorial at the Open VT workshop at the 2025 SMB Meeting
      0•0•0•0•Updated Aug 4, 2025Aug 4, 2025

    • gpu-benchmark-2026

      Public
      Cuda
      •0•0•0•0•Updated Jun 3, 2025Jun 3, 2025

    • CellBasedComparison2017

      Public
      Code for the 2017 Cell Based Comparison paper https://doi.org/10.1371/journal.pcbi.1005387
      paper-tutorialmigrated-from-svn
      paper-tutorialmigrated-from-svn
      C++
      •0•0•0•0•Updated May 12, 2025May 12, 2025

    • doxygen-releases

      Public
      GitHub pages site containing static doxygen for individual releases
      HTML
      •0•0•0•0•Updated Feb 3, 2025Feb 3, 2025

    • ImmersedBoundaryWorkshop

      Public
      Chaste / Oxford 2023 - Immersed Boundary Workshop Code
      C++
      •0•0•0•0•Updated Jan 9, 2025Jan 9, 2025

    • IntroToChasteCpp2025

      Public
      An introduction to using Chaste from C++ for the 2025 Nottingham Workshop
      C++
      •2•0•0•0•Updated Jan 9, 2025Jan 9, 2025

    • PyChaste

      Public
      A Python Wrapper for Chaste
      C++
      •
      Other
      •0•4•6•2•Updated Jan 8, 2025Jan 8, 2025

    • project_FunctionalCuration

      Public
      Git conversion of old SVN user project FunctionalCuration
      C++
      •0•0•0•0•Updated Jul 8, 2024Jul 8, 2024

    • project_Wisc2013

      Public
      Git conversion of old SVN user project Wisc2013
      C++
      •0•0•0•0•Updated Jul 8, 2024Jul 8, 2024

    • project_CardiacEpVerification

      Public
      Git conversion of old SVN user project CardiacEpVerification
      C++
      •0•0•0•0•Updated Jul 5, 2024Jul 5, 2024

    • IntroToChasteCpp

      Public
      An introduction to using Chaste from C++
      C++
      •2•1•1•0•Updated May 9, 2024May 9, 2024

    • project_DanieleM

      Public
      Git conversion of old SVN user project DanieleM
      C++
      •0•0•0•0•Updated May 2, 2024May 2, 2024

    • project_PlosOne_mRNA

      Public
      Git conversion of old SVN user project PlosOne_mRNA
      MATLAB
      •0•0•0•0•Updated May 2, 2024May 2, 2024

    • project_Plos2013

      Public
      Git conversion of old SVN user project Plos2013
      C++
      •0•0•0•0•Updated May 2, 2024May 2, 2024

    • project_Plos2012

      Public
      Git conversion of old SVN user project Plos2012
      C++
      •0•0•0•0•Updated May 2, 2024May 2, 2024
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