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    • Imputation Server 2 workflow to facilitate genotype imputation at scale.
      Nextflow
      MIT License
      154821Updated May 7, 2026May 7, 2026
    • Nextflow pipeline to analyze ONT-UMI-Sequencing data
      Python
      Mozilla Public License 2.0
      71301Updated May 6, 2026May 6, 2026
    • HTML
      MIT License
      3511Updated Dec 16, 2025Dec 16, 2025
    • Java
      MIT License
      4200Updated Nov 27, 2025Nov 27, 2025
    • mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes
      Nextflow
      MIT License
      52290Updated Nov 13, 2025Nov 13, 2025
    • MIT License
      1000Updated Nov 4, 2025Nov 4, 2025
    • TeX
      0000Updated Oct 14, 2025Oct 14, 2025
    • nf-gwas

      Public
      A nextflow pipeline to perform state-of-the-art genome-wide association studies.
      Nextflow
      MIT License
      288290Updated Oct 7, 2025Oct 7, 2025
    • Collection of tools to work with genomic datasets
      Java
      MIT License
      1310Updated Oct 7, 2025Oct 7, 2025
    • A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.
      Java
      MIT License
      91741Updated Sep 6, 2025Sep 6, 2025
    • Prepare your data for Genotype Imputation
      Nextflow
      MIT License
      0000Updated Aug 22, 2025Aug 22, 2025
    • Free mtDNA Haplogroup Classification Service
      Java
      MIT License
      63290Updated Jul 3, 2025Jul 3, 2025
    • ngs-class

      Public
      Next Gen Sequencing Course - Medical University of Innsbruck
      Nextflow
      0200Updated Apr 30, 2025Apr 30, 2025
    • Source of http://apps.cloudgene.io
      HTML
      0000Updated Apr 11, 2025Apr 11, 2025
    • mitoverse

      Public
      Documentation for the Mitoverse Platform
      HTML
      0200Updated Dec 29, 2024Dec 29, 2024
    • Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and prod…
      Java
      GNU Affero General Public License v3.0
      4985460Updated Sep 28, 2024Sep 28, 2024
    • Cloudgene Website
      HTML
      0000Updated Aug 1, 2024Aug 1, 2024
    • Nextflow
      2001Updated Jul 17, 2024Jul 17, 2024
    • Shell
      0000Updated Jul 15, 2024Jul 15, 2024
    • cloudgene

      Public
      A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.
      Java
      GNU Affero General Public License v3.0
      2039226Updated Apr 19, 2024Apr 19, 2024
    • A R test repo
      MIT License
      0000Updated Mar 20, 2024Mar 20, 2024
    • Michigan Imputation Server Workshop
      HTML
      0000Updated Nov 2, 2023Nov 2, 2023
    • Cloudgene Installation script.
      Shell
      1000Updated Sep 20, 2023Sep 20, 2023
    • Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies
      HTML
      MIT License
      21741Updated Jun 14, 2023Jun 14, 2023
    • mt-c1

      Public
      Functionally relevant mutation sites in the human mitochondrial respiratory complex 1 (MT-C1)
      HTML
      0000Updated May 16, 2023May 16, 2023
    • SDKs for Cloudgene
      Java
      0001Updated May 14, 2023May 14, 2023
    • haplogrep-core
      Java
      Apache License 2.0
      0010Updated Apr 27, 2023Apr 27, 2023
    • HTML
      MIT License
      0300Updated Mar 29, 2023Mar 29, 2023
    • HTML
      MIT License
      0300Updated Mar 29, 2023Mar 29, 2023
    • HTML
      MIT License
      0400Updated Mar 29, 2023Mar 29, 2023
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