Skip to content
Change the repository type filter

All

    Repositories list

    • The gut-to-soil axis microbiome analysis tutorial
      Makefile
      4131Updated May 8, 2026May 8, 2026
    • q2-boots

      Public
      q2-boots: bootstrapped and rarefaction-based alpha and beta diversity analyses 🥾
      Python
      BSD 3-Clause "New" or "Revised" License
      63114Updated May 8, 2026May 8, 2026
    • Python
      BSD 3-Clause "New" or "Revised" License
      18451Updated May 8, 2026May 8, 2026
    • resources

      Public
      Source for QIIME 2 Resources page.
      TeX
      BSD 3-Clause "New" or "Revised" License
      3120Updated May 8, 2026May 8, 2026
    • Makefile
      BSD 3-Clause "New" or "Revised" License
      10541Updated May 8, 2026May 8, 2026
    • Python
      BSD 3-Clause "New" or "Revised" License
      17361Updated May 8, 2026May 8, 2026
    • q2-types

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      4317262Updated May 8, 2026May 8, 2026
    • This plugin exists to define integration tests between interfaces and the framework.
      Python
      BSD 3-Clause "New" or "Revised" License
      6000Updated May 8, 2026May 8, 2026
    • q2cli

      Public
      Command line interface for QIIME 2
      Python
      BSD 3-Clause "New" or "Revised" License
      2920122Updated May 8, 2026May 8, 2026
    • Design template package for QIIME 2 Plugins
      Python
      BSD 3-Clause "New" or "Revised" License
      15400Updated May 8, 2026May 8, 2026
    • library

      Public
      A website for sharing QIIME 2 Plugins
      Svelte
      BSD 3-Clause "New" or "Revised" License
      2032Updated May 8, 2026May 8, 2026
    • QIIME 2 plugin supporting taxonomic classification
      Python
      BSD 3-Clause "New" or "Revised" License
      402091Updated May 7, 2026May 7, 2026
    • Source for QIIME 2 amplicon documentation.
      Makefile
      2260Updated May 6, 2026May 6, 2026
    • homepage

      Public
      QIIME 2 Homepage
      Astro
      MIT License
      0002Updated May 4, 2026May 4, 2026
    • Stores a list of the repos that are included in the QIIME 2 library
      BSD 3-Clause "New" or "Revised" License
      10011Updated Apr 30, 2026Apr 30, 2026
    • q2view

      Public
      A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
      TypeScript
      BSD 3-Clause "New" or "Revised" License
      3120Updated Apr 30, 2026Apr 30, 2026
    • Moving Pictures Tutorial source
      Makefile
      1000Updated Apr 24, 2026Apr 24, 2026
    • Python
      BSD 3-Clause "New" or "Revised" License
      5000Updated Apr 21, 2026Apr 21, 2026
    • Python
      0000Updated Apr 17, 2026Apr 17, 2026
    • q2

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      0000Updated Apr 16, 2026Apr 16, 2026
    • QIIME 2 plugin for paired sample comparisons
      Python
      BSD 3-Clause "New" or "Revised" License
      179281Updated Apr 16, 2026Apr 16, 2026
    • Python
      BSD 3-Clause "New" or "Revised" License
      2110Updated Apr 16, 2026Apr 16, 2026
    • q2-vizard

      Public
      The first choice of wizard lizards for interactive, generalized microbiome data visualization!
      Python
      BSD 3-Clause "New" or "Revised" License
      13182Updated Apr 16, 2026Apr 16, 2026
    • Phylogenetic reconstruction, and operations on phylogenetic trees.
      Python
      BSD 3-Clause "New" or "Revised" License
      20520Updated Apr 16, 2026Apr 16, 2026
    • q2-dada2

      Public
      QIIME 2 plugin wrapping DADA2
      Python
      BSD 3-Clause "New" or "Revised" License
      4024113Updated Apr 16, 2026Apr 16, 2026
    • Support for multiple sequence alignment in QIIME 2.
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      23261Updated Apr 16, 2026Apr 16, 2026
    • Quality filtering for QIIME2
      Python
      BSD 3-Clause "New" or "Revised" License
      14130Updated Apr 16, 2026Apr 16, 2026
    • q2-taxa

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      303432Updated Apr 16, 2026Apr 16, 2026
    • q2-demux

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      20191Updated Apr 16, 2026Apr 16, 2026
    • Python
      BSD 3-Clause "New" or "Revised" License
      443441Updated Apr 16, 2026Apr 16, 2026
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.