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Enhanced volcano plots#111

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WackerO merged 10 commits intoqbic-pipelines:devfrom
WackerO:volcano
Mar 31, 2022
Merged

Enhanced volcano plots#111
WackerO merged 10 commits intoqbic-pipelines:devfrom
WackerO:volcano

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@WackerO
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@WackerO WackerO commented Mar 4, 2022

Many thanks to contributing to qbic-pipelines!

This fixes issue #88 and introduces enhanced volcano plots which mark significant genes.

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • Ensure the test suite passes (nextflow run . -profile test,docker).
  • Documentation in docs is updated
  • CHANGELOG.md is updated
  • README.md is updated

Learn more about contributing: https://github.com/qbic-pipelines/rnadeseq/tree/master/.github/CONTRIBUTING.md

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WackerO commented Mar 4, 2022

RNAseq_report_volcano.html.zip
Attached is an example report featuring the new plots.

@ggabernet ggabernet closed this Mar 31, 2022
@ggabernet ggabernet reopened this Mar 31, 2022
Comment thread assets/RNAseq_report.Rmd Outdated
Co-authored-by: Gisela Gabernet <gisela.gabernet@gmail.com>
@WackerO WackerO merged commit a5436b8 into qbic-pipelines:dev Mar 31, 2022
@WackerO WackerO deleted the volcano branch March 31, 2022 08:22
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2 participants