Welcome to my page! This is the place where I open-source stuff
I'm Ruba passionate Bioinformatician with a strong background in:
- ๐ฌ NGS data analysis (Variant Calling, RNA-Seq, Single-cell RNA-Seq)
- ๐งฌ Structural Bioinformatics and Molecular Modeling
- ๐งช Computer-Aided Drug Design (CADD) and in silico analysis
- ๐ป Proficient in Python, R, and Linux
- ๐ค Enthusiastic about integrating machine learning with biological data
I'm currently working on integrating bulk RNA-seq data with single-cell data for insights into host response mechanisms for a viral infection and immune dynamics.
| Project | Description | Tech |
|---|---|---|
| ๐ Bulk RNA-Seq Pipeline | A reproducible RNA-seq pipeline for PBMC vs Serum comparison across dengue infection datasets. | STAR, DESeq2, R |
| ๐ Mutation Workflow | Mutation analysis in plant genome. | VEP, SnpEff |
๐ง *"Empowering biology through computation."* ๐ป