COVID Phylogeny

Creating a tool for phylogenetic analysis of COVID-19 sequence data

Communication

For the time being, there is a #phylogeny channel on the Slack group (check out the virtual-biohackathon@googlegroups.com group for the invitation link). During the BioHackathon, we'll update this section.

Resources

Data

• SARS-CoV-2 sequences GenBank

Ideas for projects

• Working on the phylogeny of COVID 19 (similar to this analysis, and more connected to this article in terms of receptors and conserved sites).

The current list of SARS-CoV-2 sequences GenBank can be used for this purpose, and, if developed as a workflow, it can connect to the "main" public sequence resource deliverable/task - possibly also to the biostatistics and the Machine Learning ones.

Participants

• Fotis Psomopoulos