Home Learning

Jump to bottom Edit New page

Jun Hattori edited this page Apr 10, 2020 · 76 revisions

English -- French -- 日本語 -- ไทย -- Admin

Background

Many people have time to learn about virus genome at home
Create a home learning material for bioinformatics beginners
Presentation

Background

How to Map COVID-19 Spread?

Tutorial (5 min)

What is RNA Sequence?

How to Download Sequences?

How to download the RNA sequence data of coronaviruses from public data archive.
Tutorial (5 min)

How to Calculate GC-Content?

RNA sequence consists of 4 type of characters (= nucleotides): A & T(U) & G & C. What is the potion of G & C?
Tutorial (5 min)

How to Compare Poly-A Length?

Tutorial

ATGC or AUGC which and why?

Tutorial

Where are Genes?

From the sequence, proteins are translated. Those regions of the sequence are called open reading frame (ORF).
Tutorial (10min)

How to Draw Phylogenetic Tree

Tutorial (10 min)

Working Plan

Date: April 5-10 (6 days)
Time: 19:00-22:00 Japan (= 12:00-15:00 Central Europe)
Slack: #homelearning
Remo: https://live.remo.co/e/virtual-biohackathon

Participants

⚡