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Pull requests: waveygang/wfmash

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Pull requests list

Fix with faigz
#383 opened Aug 8, 2025 by ekg Collaborator Loading…
Fix mapping truncation issue with nested taskflow subflows
#382 opened Aug 8, 2025 by ekg Collaborator Loading…
Add ANI estimation support for alignment-only mode
#380 opened Aug 5, 2025 by AndreaGuarracino Member Loading…
Implement work-stealing with subflows for mapping phase
#379 opened Aug 3, 2025 by ekg Collaborator Loading…
Fix deadlock by using a dedicated executor for fragment batches
#378 opened Aug 1, 2025 by unavailable-2374 Contributor Loading…
fix stdout flush && high-concurrency
#376 opened Aug 1, 2025 by unavailable-2374 Contributor Loading…
update defaults for sketch density, block length, scaffolding
#368 opened Jul 6, 2025 by ekg Collaborator Loading…
modify -H parameter to set minimum hits floor with default 4
#359 opened May 8, 2025 by ekg Collaborator Loading…
Flat index thin map
#358 opened May 6, 2025 by ekg Collaborator Loading…
Flat index
#355 opened May 1, 2025 by ekg Collaborator Loading…
Add configurable chunk size for merging fragment mappings
#349 opened Apr 11, 2025 by ekg Collaborator Draft
Dynamic indicators
#337 opened Mar 26, 2025 by ekg Collaborator Draft
Use multiset jaccard
#278 opened Oct 4, 2024 by bkille Contributor Draft
ProTip! Updated in the last three days: updated:>2026-05-07.