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Add "phenotype" to COB #225

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Add "phenotype" to COB #225

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f9426e8
Add "phenotype" to COB
matentzn Jan 26, 2023
68c0ee6
Merge branch 'master' into matentzn-patch-2
matentzn Mar 8, 2026
d8b57fc
Add new phenotype / attribute / quality draft
matentzn Mar 8, 2026
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6 changes: 4 additions & 2 deletions src/ontology/cob-edit.tsv
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Expand Up @@ -71,8 +71,10 @@ UBERON:0001062 anatomical entity owl:Class Biological entity that is either an i
COB:has-material-boundary has material boundary owl:ObjectProperty REPLACED immaterial entity material entity RO:0002219 surrounded by like RO has 2D boundary? RO surrounded by?
COB:material-boundary-of material boundary of owl:ObjectProperty REPLACED material entity immaterial entity has material boundary RO:0002221 surrounds
BFO:0000029 site owl:Class FULL TO DISCUSS: in previous COB release immaterial entity
Characteristics specifically depend on other entities. Characteristics of characteristics are not allowed. characteristics of information? length, size?
COB:0000502 characteristic owl:Class BASE replace by SDC?
COB:0000502 characteristic owl:Class BASE Characteristics specifically depend on other entities. Characteristics of characteristics are not allowed.
PATO:0000001 quality owl:Class A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities. ROOT characteristic
OBA:0000001 biological attribute owl:Class A characteristic that is a phenotypic manifestation of an organism. ROOT quality
UPHENO:0001001 phenotype owl:Class A characteristic that is a phenotypic manifestation of an organism. ROOT biological attribute
COB:has-characteristic has characteristic owl:ObjectProperty REPLACED characteristic RO:0000053 has characteristic domain: not characteristic ?
COB:characteristic-of characteristic of owl:ObjectProperty REPLACED characteristic has characteristic RO:0000052 characteristic of range: not characteristic ?
PATO:0000125 mass owl:Class A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter. FULL in previous COB characteristic
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