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DEACON_FILTER module errors if single fastq given has name collision with prefix #11302

@fanninpm

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@fanninpm

Have you checked the docs?

Description of the bug

I'm using the Deacon module to decontaminate ONT data. Let's say I have the following sample sheet:

sample,fastq_1,fastq_2
NTC,NTC.fastq.gz,

The Deacon module then cannot find the output file because it's named the same as the input file.


(By the way, the links next to the checkboxes no longer point to the desired places.)

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